Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69724.1 | ABK70045.1 | MSMEG_1419 | MSMEG_4367 | Conserved hypothetical protein. | Formamidase; Identified by match to protein family HMM PF03069. | 0.430 |
ABK69724.1 | ABK72215.1 | MSMEG_1419 | MSMEG_2985 | Conserved hypothetical protein. | Fumarate hydratase class I, anaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.505 |
ABK69724.1 | ABK73839.1 | MSMEG_1419 | MSMEG_6242 | Conserved hypothetical protein. | Alcohol dehydrogenase, iron-containing; Identified by match to protein family HMM PF00465. | 0.520 |
ABK69724.1 | ABK75141.1 | MSMEG_1419 | MSMEG_1417 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00903. | 0.638 |
ABK69724.1 | ABK75365.1 | MSMEG_1419 | MSMEG_5719 | Conserved hypothetical protein. | Oxidoreductase; Identified by match to protein family HMM PF01494. | 0.409 |
ABK69724.1 | ABK76201.1 | MSMEG_1419 | MSMEG_1418 | Conserved hypothetical protein. | RNA polymerase ECF-type sigma factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily. | 0.563 |
ABK70045.1 | ABK69724.1 | MSMEG_4367 | MSMEG_1419 | Formamidase; Identified by match to protein family HMM PF03069. | Conserved hypothetical protein. | 0.430 |
ABK70045.1 | ABK72215.1 | MSMEG_4367 | MSMEG_2985 | Formamidase; Identified by match to protein family HMM PF03069. | Fumarate hydratase class I, anaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.950 |
ABK70045.1 | ABK73839.1 | MSMEG_4367 | MSMEG_6242 | Formamidase; Identified by match to protein family HMM PF03069. | Alcohol dehydrogenase, iron-containing; Identified by match to protein family HMM PF00465. | 0.870 |
ABK72215.1 | ABK69724.1 | MSMEG_2985 | MSMEG_1419 | Fumarate hydratase class I, anaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Conserved hypothetical protein. | 0.505 |
ABK72215.1 | ABK70045.1 | MSMEG_2985 | MSMEG_4367 | Fumarate hydratase class I, anaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Formamidase; Identified by match to protein family HMM PF03069. | 0.950 |
ABK73839.1 | ABK69724.1 | MSMEG_6242 | MSMEG_1419 | Alcohol dehydrogenase, iron-containing; Identified by match to protein family HMM PF00465. | Conserved hypothetical protein. | 0.520 |
ABK73839.1 | ABK70045.1 | MSMEG_6242 | MSMEG_4367 | Alcohol dehydrogenase, iron-containing; Identified by match to protein family HMM PF00465. | Formamidase; Identified by match to protein family HMM PF03069. | 0.870 |
ABK75141.1 | ABK69724.1 | MSMEG_1417 | MSMEG_1419 | Identified by match to protein family HMM PF00903. | Conserved hypothetical protein. | 0.638 |
ABK75141.1 | ABK76201.1 | MSMEG_1417 | MSMEG_1418 | Identified by match to protein family HMM PF00903. | RNA polymerase ECF-type sigma factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily. | 0.848 |
ABK75365.1 | ABK69724.1 | MSMEG_5719 | MSMEG_1419 | Oxidoreductase; Identified by match to protein family HMM PF01494. | Conserved hypothetical protein. | 0.409 |
ABK76201.1 | ABK69724.1 | MSMEG_1418 | MSMEG_1419 | RNA polymerase ECF-type sigma factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily. | Conserved hypothetical protein. | 0.563 |
ABK76201.1 | ABK75141.1 | MSMEG_1418 | MSMEG_1417 | RNA polymerase ECF-type sigma factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily. | Identified by match to protein family HMM PF00903. | 0.848 |