STRINGSTRING
ABK69724.1 ABK69724.1 ABK75141.1 ABK75141.1 ABK76201.1 ABK76201.1 ABK73839.1 ABK73839.1 ABK72215.1 ABK72215.1 ABK70045.1 ABK70045.1 ABK75365.1 ABK75365.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK69724.1Conserved hypothetical protein. (236 aa)    
Predicted Functional Partners:
ABK75141.1
Identified by match to protein family HMM PF00903.
 
    0.638
ABK76201.1
RNA polymerase ECF-type sigma factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.563
ABK73839.1
Alcohol dehydrogenase, iron-containing; Identified by match to protein family HMM PF00465.
   
  
 0.520
ABK72215.1
Fumarate hydratase class I, anaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
  
 0.505
ABK70045.1
Formamidase; Identified by match to protein family HMM PF03069.
   
  
 0.430
ABK75365.1
Oxidoreductase; Identified by match to protein family HMM PF01494.
  
    0.409
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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