Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69852.1 | ABK75779.1 | MSMEG_1430 | MSMEG_1427 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | Transmembrane efflux protein; Identified by match to protein family HMM PF07690. | 0.635 |
ABK69878.1 | ABK75779.1 | MSMEG_3316 | MSMEG_1427 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690. | Transmembrane efflux protein; Identified by match to protein family HMM PF07690. | 0.498 |
ABK71334.1 | ABK75779.1 | MSMEG_6524 | MSMEG_1427 | ABC Polyamine/Opine/Phosphonate transporter, periplasmic ligand binding protein. | Transmembrane efflux protein; Identified by match to protein family HMM PF07690. | 0.423 |
ABK72530.1 | ABK75779.1 | MSMEG_3815 | MSMEG_1427 | Possible drug efflux membrane protein; Identified by match to protein family HMM PF07690. | Transmembrane efflux protein; Identified by match to protein family HMM PF07690. | 0.634 |
ABK73630.1 | ABK75779.1 | MSMEG_0449 | MSMEG_1427 | Transporter, major facilitator family protein, putative; Identified by match to protein family HMM PF00582; match to protein family HMM PF07690. | Transmembrane efflux protein; Identified by match to protein family HMM PF07690. | 0.523 |
ABK74489.1 | ABK75779.1 | MSMEG_6668 | MSMEG_1427 | ABC transporter, periplasmic substrate-binding protein, putative. | Transmembrane efflux protein; Identified by match to protein family HMM PF07690. | 0.427 |
ABK75662.1 | ABK75779.1 | MSMEG_3636 | MSMEG_1427 | Ferric iron-binding periplasmic protein of ABC transporter; Identified by match to protein family HMM PF01547. | Transmembrane efflux protein; Identified by match to protein family HMM PF07690. | 0.423 |
ABK75779.1 | ABK69852.1 | MSMEG_1427 | MSMEG_1430 | Transmembrane efflux protein; Identified by match to protein family HMM PF07690. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.635 |
ABK75779.1 | ABK69878.1 | MSMEG_1427 | MSMEG_3316 | Transmembrane efflux protein; Identified by match to protein family HMM PF07690. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690. | 0.498 |
ABK75779.1 | ABK71334.1 | MSMEG_1427 | MSMEG_6524 | Transmembrane efflux protein; Identified by match to protein family HMM PF07690. | ABC Polyamine/Opine/Phosphonate transporter, periplasmic ligand binding protein. | 0.423 |
ABK75779.1 | ABK72530.1 | MSMEG_1427 | MSMEG_3815 | Transmembrane efflux protein; Identified by match to protein family HMM PF07690. | Possible drug efflux membrane protein; Identified by match to protein family HMM PF07690. | 0.634 |
ABK75779.1 | ABK73630.1 | MSMEG_1427 | MSMEG_0449 | Transmembrane efflux protein; Identified by match to protein family HMM PF07690. | Transporter, major facilitator family protein, putative; Identified by match to protein family HMM PF00582; match to protein family HMM PF07690. | 0.523 |
ABK75779.1 | ABK74489.1 | MSMEG_1427 | MSMEG_6668 | Transmembrane efflux protein; Identified by match to protein family HMM PF07690. | ABC transporter, periplasmic substrate-binding protein, putative. | 0.427 |
ABK75779.1 | ABK75662.1 | MSMEG_1427 | MSMEG_3636 | Transmembrane efflux protein; Identified by match to protein family HMM PF07690. | Ferric iron-binding periplasmic protein of ABC transporter; Identified by match to protein family HMM PF01547. | 0.423 |