STRINGSTRING
ABK70026.1 ABK70026.1 ABK69842.1 ABK69842.1 ABK72192.1 ABK72192.1 ABK71147.1 ABK71147.1 ABK72916.1 ABK72916.1 ABK75848.1 ABK75848.1 ABK74273.1 ABK74273.1 ABK70103.1 ABK70103.1 ABK71954.1 ABK71954.1 rpsJ rpsJ ABK73847.1 ABK73847.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70026.1Thioesterase. (271 aa)    
Predicted Functional Partners:
ABK69842.1
Alpha/beta hydrolase; Identified by match to protein family HMM PF00561.
 
 
 0.649
ABK72192.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993.
 
    0.643
ABK71147.1
TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440.
 
    0.639
ABK72916.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
 
  
 0.623
ABK75848.1
Fatty acid desaturase; Identified by match to protein family HMM PF00487.
 
  
 0.622
ABK74273.1
Bifunctional wax ester synthase/acyl-CoA diacylglycerol acyltransferase; Identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; Belongs to the long-chain O-acyltransferase family.
 
  
 0.622
ABK70103.1
Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.
 
  
 0.612
ABK71954.1
Putative non-ribosomal peptide synthetase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733.
  
 
 0.610
rpsJ
Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
  
    0.608
ABK73847.1
2,4-dienoyl-coA reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF00724; match to protein family HMM PF03486; match to protein family HMM PF07992.
 
  
 0.606
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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