Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69842.1 | ABK70026.1 | MSMEG_2203 | MSMEG_1433 | Alpha/beta hydrolase; Identified by match to protein family HMM PF00561. | Thioesterase. | 0.649 |
ABK69842.1 | ABK70103.1 | MSMEG_2203 | MSMEG_4757 | Alpha/beta hydrolase; Identified by match to protein family HMM PF00561. | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | 0.454 |
ABK69842.1 | ABK71147.1 | MSMEG_2203 | MSMEG_1741 | Alpha/beta hydrolase; Identified by match to protein family HMM PF00561. | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.531 |
ABK69842.1 | ABK72192.1 | MSMEG_2203 | MSMEG_1623 | Alpha/beta hydrolase; Identified by match to protein family HMM PF00561. | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993. | 0.418 |
ABK69842.1 | ABK72916.1 | MSMEG_2203 | MSMEG_2080 | Alpha/beta hydrolase; Identified by match to protein family HMM PF00561. | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | 0.599 |
ABK69842.1 | ABK74273.1 | MSMEG_2203 | MSMEG_6322 | Alpha/beta hydrolase; Identified by match to protein family HMM PF00561. | Bifunctional wax ester synthase/acyl-CoA diacylglycerol acyltransferase; Identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; Belongs to the long-chain O-acyltransferase family. | 0.642 |
ABK70026.1 | ABK69842.1 | MSMEG_1433 | MSMEG_2203 | Thioesterase. | Alpha/beta hydrolase; Identified by match to protein family HMM PF00561. | 0.649 |
ABK70026.1 | ABK70103.1 | MSMEG_1433 | MSMEG_4757 | Thioesterase. | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | 0.612 |
ABK70026.1 | ABK71147.1 | MSMEG_1433 | MSMEG_1741 | Thioesterase. | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.639 |
ABK70026.1 | ABK71954.1 | MSMEG_1433 | MSMEG_4515 | Thioesterase. | Putative non-ribosomal peptide synthetase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733. | 0.610 |
ABK70026.1 | ABK72192.1 | MSMEG_1433 | MSMEG_1623 | Thioesterase. | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993. | 0.643 |
ABK70026.1 | ABK72916.1 | MSMEG_1433 | MSMEG_2080 | Thioesterase. | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | 0.623 |
ABK70026.1 | ABK73847.1 | MSMEG_1433 | MSMEG_5124 | Thioesterase. | 2,4-dienoyl-coA reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF00724; match to protein family HMM PF03486; match to protein family HMM PF07992. | 0.606 |
ABK70026.1 | ABK74273.1 | MSMEG_1433 | MSMEG_6322 | Thioesterase. | Bifunctional wax ester synthase/acyl-CoA diacylglycerol acyltransferase; Identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; Belongs to the long-chain O-acyltransferase family. | 0.622 |
ABK70026.1 | ABK75848.1 | MSMEG_1433 | MSMEG_1743 | Thioesterase. | Fatty acid desaturase; Identified by match to protein family HMM PF00487. | 0.622 |
ABK70026.1 | rpsJ | MSMEG_1433 | MSMEG_1435 | Thioesterase. | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.608 |
ABK70103.1 | ABK69842.1 | MSMEG_4757 | MSMEG_2203 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | Alpha/beta hydrolase; Identified by match to protein family HMM PF00561. | 0.454 |
ABK70103.1 | ABK70026.1 | MSMEG_4757 | MSMEG_1433 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | Thioesterase. | 0.612 |
ABK70103.1 | ABK71954.1 | MSMEG_4757 | MSMEG_4515 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | Putative non-ribosomal peptide synthetase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733. | 0.709 |
ABK70103.1 | ABK72192.1 | MSMEG_4757 | MSMEG_1623 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993. | 0.487 |
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