Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69527.1 | ABK70551.1 | MSMEG_0428 | MSMEG_1416 | Nitrite reductase [NAD(P)H] small subunit. | Pyridine nucleotide-disulphide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | 0.714 |
| ABK69527.1 | ABK73285.1 | MSMEG_0428 | MSMEG_1460 | Nitrite reductase [NAD(P)H] small subunit. | Pyridine nucleotide-disulphide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | 0.710 |
| ABK69527.1 | ABK73400.1 | MSMEG_0428 | MSMEG_1459 | Nitrite reductase [NAD(P)H] small subunit. | Rieske [2Fe-2S] domain protein; Identified by match to protein family HMM PF00355. | 0.903 |
| ABK69527.1 | ABK75755.1 | MSMEG_0428 | MSMEG_3594 | Nitrite reductase [NAD(P)H] small subunit. | Anthranilate dioxygenase reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | 0.731 |
| ABK70445.1 | ABK70473.1 | MSMEG_1462 | MSMEG_1464 | Ferredoxin; Identified by match to protein family HMM PF00355. | Translation initiation inhibitor; Identified by match to protein family HMM PF01042. | 0.791 |
| ABK70445.1 | ABK70551.1 | MSMEG_1462 | MSMEG_1416 | Ferredoxin; Identified by match to protein family HMM PF00355. | Pyridine nucleotide-disulphide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | 0.963 |
| ABK70445.1 | ABK73285.1 | MSMEG_1462 | MSMEG_1460 | Ferredoxin; Identified by match to protein family HMM PF00355. | Pyridine nucleotide-disulphide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | 0.990 |
| ABK70445.1 | ABK73400.1 | MSMEG_1462 | MSMEG_1459 | Ferredoxin; Identified by match to protein family HMM PF00355. | Rieske [2Fe-2S] domain protein; Identified by match to protein family HMM PF00355. | 0.906 |
| ABK70445.1 | ABK75755.1 | MSMEG_1462 | MSMEG_3594 | Ferredoxin; Identified by match to protein family HMM PF00355. | Anthranilate dioxygenase reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | 0.963 |
| ABK70445.1 | ABK76098.1 | MSMEG_1462 | MSMEG_1461 | Ferredoxin; Identified by match to protein family HMM PF00355. | 5-oxovalerate dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.758 |
| ABK70445.1 | ABK76182.1 | MSMEG_1462 | MSMEG_1463 | Ferredoxin; Identified by match to protein family HMM PF00355. | Gamma-glutamyltranspeptidase; Identified by match to protein family HMM PF01019. | 0.841 |
| ABK70473.1 | ABK70445.1 | MSMEG_1464 | MSMEG_1462 | Translation initiation inhibitor; Identified by match to protein family HMM PF01042. | Ferredoxin; Identified by match to protein family HMM PF00355. | 0.791 |
| ABK70473.1 | ABK73285.1 | MSMEG_1464 | MSMEG_1460 | Translation initiation inhibitor; Identified by match to protein family HMM PF01042. | Pyridine nucleotide-disulphide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | 0.752 |
| ABK70473.1 | ABK73400.1 | MSMEG_1464 | MSMEG_1459 | Translation initiation inhibitor; Identified by match to protein family HMM PF01042. | Rieske [2Fe-2S] domain protein; Identified by match to protein family HMM PF00355. | 0.757 |
| ABK70473.1 | ABK76098.1 | MSMEG_1464 | MSMEG_1461 | Translation initiation inhibitor; Identified by match to protein family HMM PF01042. | 5-oxovalerate dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.789 |
| ABK70473.1 | ABK76182.1 | MSMEG_1464 | MSMEG_1463 | Translation initiation inhibitor; Identified by match to protein family HMM PF01042. | Gamma-glutamyltranspeptidase; Identified by match to protein family HMM PF01019. | 0.808 |
| ABK70551.1 | ABK69527.1 | MSMEG_1416 | MSMEG_0428 | Pyridine nucleotide-disulphide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | Nitrite reductase [NAD(P)H] small subunit. | 0.714 |
| ABK70551.1 | ABK70445.1 | MSMEG_1416 | MSMEG_1462 | Pyridine nucleotide-disulphide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | Ferredoxin; Identified by match to protein family HMM PF00355. | 0.963 |
| ABK70551.1 | ABK72366.1 | MSMEG_1416 | MSMEG_1840 | Pyridine nucleotide-disulphide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | Rubredoxin; Identified by match to protein family HMM PF00301; Belongs to the rubredoxin family. | 0.703 |
| ABK70551.1 | ABK73285.1 | MSMEG_1416 | MSMEG_1460 | Pyridine nucleotide-disulphide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | Pyridine nucleotide-disulphide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | 0.916 |
page 1 of 4