Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK71647.1 | ABK71821.1 | MSMEG_1508 | MSMEG_1506 | Amino acid permease-associated region; Identified by match to protein family HMM PF00324. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.678 |
ABK71647.1 | ABK74029.1 | MSMEG_1508 | MSMEG_1507 | Amino acid permease-associated region; Identified by match to protein family HMM PF00324. | D-aminopeptidase; Identified by match to protein family HMM PF03576. | 0.786 |
ABK71647.1 | ABK76180.1 | MSMEG_1508 | MSMEG_1505 | Amino acid permease-associated region; Identified by match to protein family HMM PF00324. | Integral membrane protein; Identified by match to protein family HMM PF00892. | 0.628 |
ABK71810.1 | ABK74029.1 | MSMEG_4392 | MSMEG_1507 | Organophopsphate acid anhydrase; Identified by match to protein family HMM PF01979. | D-aminopeptidase; Identified by match to protein family HMM PF03576. | 0.506 |
ABK71821.1 | ABK71647.1 | MSMEG_1506 | MSMEG_1508 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | Amino acid permease-associated region; Identified by match to protein family HMM PF00324. | 0.678 |
ABK71821.1 | ABK74029.1 | MSMEG_1506 | MSMEG_1507 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | D-aminopeptidase; Identified by match to protein family HMM PF03576. | 0.636 |
ABK71821.1 | ABK76180.1 | MSMEG_1506 | MSMEG_1505 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | Integral membrane protein; Identified by match to protein family HMM PF00892. | 0.814 |
ABK74029.1 | ABK71647.1 | MSMEG_1507 | MSMEG_1508 | D-aminopeptidase; Identified by match to protein family HMM PF03576. | Amino acid permease-associated region; Identified by match to protein family HMM PF00324. | 0.786 |
ABK74029.1 | ABK71810.1 | MSMEG_1507 | MSMEG_4392 | D-aminopeptidase; Identified by match to protein family HMM PF03576. | Organophopsphate acid anhydrase; Identified by match to protein family HMM PF01979. | 0.506 |
ABK74029.1 | ABK71821.1 | MSMEG_1507 | MSMEG_1506 | D-aminopeptidase; Identified by match to protein family HMM PF03576. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.636 |
ABK74029.1 | ABK76180.1 | MSMEG_1507 | MSMEG_1505 | D-aminopeptidase; Identified by match to protein family HMM PF03576. | Integral membrane protein; Identified by match to protein family HMM PF00892. | 0.584 |
ABK76180.1 | ABK71647.1 | MSMEG_1505 | MSMEG_1508 | Integral membrane protein; Identified by match to protein family HMM PF00892. | Amino acid permease-associated region; Identified by match to protein family HMM PF00324. | 0.628 |
ABK76180.1 | ABK71821.1 | MSMEG_1505 | MSMEG_1506 | Integral membrane protein; Identified by match to protein family HMM PF00892. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.814 |
ABK76180.1 | ABK74029.1 | MSMEG_1505 | MSMEG_1507 | Integral membrane protein; Identified by match to protein family HMM PF00892. | D-aminopeptidase; Identified by match to protein family HMM PF03576. | 0.584 |