STRINGSTRING
ABK74029.1 ABK74029.1 ABK71647.1 ABK71647.1 ABK71821.1 ABK71821.1 ABK76180.1 ABK76180.1 ABK71810.1 ABK71810.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74029.1D-aminopeptidase; Identified by match to protein family HMM PF03576. (369 aa)    
Predicted Functional Partners:
ABK71647.1
Amino acid permease-associated region; Identified by match to protein family HMM PF00324.
  
    0.786
ABK71821.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
 
    0.636
ABK76180.1
Integral membrane protein; Identified by match to protein family HMM PF00892.
  
    0.584
ABK71810.1
Organophopsphate acid anhydrase; Identified by match to protein family HMM PF01979.
 
    0.506
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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