STRINGSTRING
ABK69916.1 ABK69916.1 ABK75088.1 ABK75088.1 tsaD tsaD rimI rimI ABK70019.1 ABK70019.1 ABK76013.1 ABK76013.1 ABK75049.1 ABK75049.1 alr alr ABK73724.1 ABK73724.1 ABK70591.1 ABK70591.1 kshA kshA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK69916.1Conserved hypothetical protein. (149 aa)    
Predicted Functional Partners:
ABK75088.1
Alpha/beta hydrolase fold; Identified by match to protein family HMM PF00561.
  
  
 0.822
tsaD
O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
    0.813
rimI
Ribosomal-protein-alanine acetyltransferase; Identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575.
  
    0.812
ABK70019.1
Peptidase M22, glycoprotease; Identified by match to protein family HMM PF00814.
  
    0.810
ABK76013.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150.
  
    0.809
ABK75049.1
Rieske [2Fe-2S] domain protein; Identified by match to protein family HMM PF00355.
 
 
 0.749
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
    0.747
ABK73724.1
Rieske [2Fe-2S] domain protein; Identified by match to protein family HMM PF00355.
 
 
 0.712
ABK70591.1
Oxygenase KshA; Identified by match to protein family HMM PF00355.
 
 
 0.691
kshA
Rieske [2Fe-2S] domain protein; Involved in the degradation of cholesterol. Catalyzes the introduction of a 9a-hydroxyl moiety into 1,4-androstadiene-3,17-dione (ADD) to yield the 9alpha-hydroxy-1,4-androstadiene-3,17-dione (9OHADD) intermediate which spontaneously form 3-hydroxy-9,10-seconandrost- 1,3,5(10)-triene-9,17-dione (HSA) via the meta-cleavage of ring B with concomitant aromatization of ring A.
 
 
 0.683
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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