Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK73012.1 | ABK74011.1 | MSMEG_1585 | MSMEG_1584 | Cupin domain protein; Identified by match to protein family HMM PF07883. | Hypothetical protein; Identified by Glimmer2; putative. | 0.779 |
ABK73012.1 | groL-2 | MSMEG_1585 | MSMEG_1583 | Cupin domain protein; Identified by match to protein family HMM PF07883. | Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.632 |
ABK73012.1 | groS | MSMEG_1585 | MSMEG_1582 | Cupin domain protein; Identified by match to protein family HMM PF07883. | Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.461 |
ABK74011.1 | ABK73012.1 | MSMEG_1584 | MSMEG_1585 | Hypothetical protein; Identified by Glimmer2; putative. | Cupin domain protein; Identified by match to protein family HMM PF07883. | 0.779 |
ABK74011.1 | groL-2 | MSMEG_1584 | MSMEG_1583 | Hypothetical protein; Identified by Glimmer2; putative. | Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.621 |
ABK74011.1 | groS | MSMEG_1584 | MSMEG_1582 | Hypothetical protein; Identified by Glimmer2; putative. | Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.453 |
groL-2 | ABK73012.1 | MSMEG_1583 | MSMEG_1585 | Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | Cupin domain protein; Identified by match to protein family HMM PF07883. | 0.632 |
groL-2 | ABK74011.1 | MSMEG_1583 | MSMEG_1584 | Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | Hypothetical protein; Identified by Glimmer2; putative. | 0.621 |
groL-2 | groS | MSMEG_1583 | MSMEG_1582 | Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.999 |
groS | ABK73012.1 | MSMEG_1582 | MSMEG_1585 | Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | Cupin domain protein; Identified by match to protein family HMM PF07883. | 0.461 |
groS | ABK74011.1 | MSMEG_1582 | MSMEG_1584 | Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | Hypothetical protein; Identified by Glimmer2; putative. | 0.453 |
groS | groL-2 | MSMEG_1582 | MSMEG_1583 | Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.999 |