ABK72359.1 protein (Mycolicibacterium smegmatis)

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ABK72359.1

RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily. (192 aa)

Predicted Functional Partners:

ABK70453.1

0.993

ABK74249.1

0.653

ABK71860.1

0.650

rshA

0.636

ABK72665.1

0.628

ABK70375.1

0.580

ABK76143.1

0.549

ABK75263.1

0.537

ABK74419.1

0.532

ABK70804.1

0.531

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK70375.1	ABK72359.1	MSMEG_0210	MSMEG_1599	LprO protein.	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.580
ABK70453.1	ABK70804.1	MSMEG_1600	MSMEG_1567	Conserved hypothetical protein.	Conserved hypothetical protein.	0.683
ABK70453.1	ABK72359.1	MSMEG_1600	MSMEG_1599	Conserved hypothetical protein.	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.993
ABK70453.1	ABK74249.1	MSMEG_1600	MSMEG_1598	Conserved hypothetical protein.	Conserved hypothetical protein.	0.736
ABK70804.1	ABK70453.1	MSMEG_1567	MSMEG_1600	Conserved hypothetical protein.	Conserved hypothetical protein.	0.683
ABK70804.1	ABK72359.1	MSMEG_1567	MSMEG_1599	Conserved hypothetical protein.	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.531
ABK70804.1	ABK74249.1	MSMEG_1567	MSMEG_1598	Conserved hypothetical protein.	Conserved hypothetical protein.	0.687
ABK71860.1	ABK72359.1	MSMEG_6281	MSMEG_1599	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520.	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.650
ABK72359.1	ABK70375.1	MSMEG_1599	MSMEG_0210	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	LprO protein.	0.580
ABK72359.1	ABK70453.1	MSMEG_1599	MSMEG_1600	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Conserved hypothetical protein.	0.993
ABK72359.1	ABK70804.1	MSMEG_1599	MSMEG_1567	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Conserved hypothetical protein.	0.531
ABK72359.1	ABK71860.1	MSMEG_1599	MSMEG_6281	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520.	0.650
ABK72359.1	ABK72665.1	MSMEG_1599	MSMEG_1804	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase sigma-F factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; match to protein family HMM TIGR02980; Belongs to the sigma-70 factor family.	0.628
ABK72359.1	ABK74249.1	MSMEG_1599	MSMEG_1598	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Conserved hypothetical protein.	0.653
ABK72359.1	ABK74419.1	MSMEG_1599	MSMEG_1487	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Conserved hypothetical protein.	0.532
ABK72359.1	ABK75263.1	MSMEG_1599	MSMEG_0219	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase sigma-70 factor, family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; match to protein family HMM TIGR02960; Belongs to the sigma-70 factor family. ECF subfamily.	0.537
ABK72359.1	ABK76143.1	MSMEG_1599	MSMEG_1747	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.549
ABK72359.1	rshA	MSMEG_1599	MSMEG_1915	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Anti-sigma factor, family protein; A redox-regulated anti-sigma factor for cognate extracytoplasmic function (ECF) sigma factor SigH. ECF sigma factors are held in an inactive form by an anti-sigma factor (Probable). Overexpression leads to increased susceptibility to diamide.	0.636
ABK72665.1	ABK72359.1	MSMEG_1804	MSMEG_1599	RNA polymerase sigma-F factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; match to protein family HMM TIGR02980; Belongs to the sigma-70 factor family.	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.628
ABK74249.1	ABK70453.1	MSMEG_1598	MSMEG_1600	Conserved hypothetical protein.	Conserved hypothetical protein.	0.736

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