STRINGSTRING
ABK70400.1 ABK70400.1 ABK72751.1 ABK72751.1 ABK75346.1 ABK75346.1 ABK73228.1 ABK73228.1 ABK71120.1 ABK71120.1 ABK71541.1 ABK71541.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70400.1Putative DNA-binding protein. (293 aa)    
Predicted Functional Partners:
ABK72751.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.535
ABK75346.1
Conserved hypothetical protein, putative; Identified by match to protein family HMM TIGR03083.
 
 
 0.491
ABK73228.1
Conserved hypothetical protein, putative; Identified by match to protein family HMM PF07398; match to protein family HMM TIGR03083.
  
 
 0.428
ABK71120.1
Conserved hypothetical protein, putative; Identified by match to protein family HMM TIGR03083.
  
 
 0.428
ABK71541.1
Conserved hypothetical protein.
  
 
 0.420
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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