STRINGSTRING
ABK74788.1 ABK74788.1 ABK75489.1 ABK75489.1 ABK73273.1 ABK73273.1 ABK72510.1 ABK72510.1 mfpA mfpA ABK75990.1 ABK75990.1 ABK72105.1 ABK72105.1 ABK71507.1 ABK71507.1 nuoI nuoI etfB etfB etfA etfA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74788.1Conserved hypothetical protein; Identified by match to protein family HMM PF05331. (121 aa)    
Predicted Functional Partners:
ABK75489.1
Identified by match to protein family HMM PF03029.
 
  
 0.996
ABK73273.1
Roadblock/LC7 domain protein; Identified by match to protein family HMM PF03259.
 
  
 0.987
ABK72510.1
Periplasmic sensor signal transduction histidine kinase; Identified by match to protein family HMM PF00672; match to protein family HMM PF02518.
 
 
 0.985
mfpA
Conserved hypothetical protein; When present on multicopy plasmids confers increased resistance to fluoroquinolone antibiotics such as ciprofloxacin and sparfloxacin but not the quinolone nalidixic acid. Forms a structure that exhibits size, shape and electrostatic similarity to B-form DNA; it may bind to DNA gyrase which is postulated to protect it from fluoroquinolones (By similarity). Belongs to the pentapeptide repeat protein family.
  
  
 0.968
ABK75990.1
Putative 3-hydroxyacyl-CoA dehydrogenase; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737.
  
 0.693
ABK72105.1
Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  0.636
ABK71507.1
Probable enoyl-CoA hydratase; Identified by match to protein family HMM PF00378.
 
  0.615
nuoI
NADH-quinone oxidoreductase, I subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 0.614
etfB
Electron transfer flavoprotein, beta subunit; Identified by similarity to SP:O85691; match to protein family HMM PF01012.
  
 
 0.608
etfA
Electron transfer flavoprotein, alpha subunit; Identified by similarity to SP:P38974; match to protein family HMM PF00766; match to protein family HMM PF01012.
  
 
 0.608
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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