Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK72151.1 | ABK76051.1 | MSMEG_1644 | MSMEG_1645 | Hypothetical protein; Identified by Glimmer2; putative. | NADH:flavin oxidoreductase/nadh oxidase; Identified by match to protein family HMM PF00724. | 0.807 |
| ABK72151.1 | folD | MSMEG_1644 | MSMEG_1647 | Hypothetical protein; Identified by Glimmer2; putative. | Tetrahydrofolate dehydrogenase/cyclohydrolase FolD; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.580 |
| ABK73153.1 | ABK73925.1 | MSMEG_6003 | MSMEG_5258 | Coenzyme A transferase, subunit B. | Steroid delta-isomerase; Identified by match to protein family HMM PF02136. | 0.633 |
| ABK73153.1 | ABK74969.1 | MSMEG_6003 | MSMEG_6001 | Coenzyme A transferase, subunit B. | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | 0.995 |
| ABK73153.1 | ABK75868.1 | MSMEG_6003 | MSMEG_0636 | Coenzyme A transferase, subunit B. | Conserved hypothetical protein. | 0.670 |
| ABK73153.1 | ABK76051.1 | MSMEG_6003 | MSMEG_1645 | Coenzyme A transferase, subunit B. | NADH:flavin oxidoreductase/nadh oxidase; Identified by match to protein family HMM PF00724. | 0.481 |
| ABK73153.1 | etfB | MSMEG_6003 | MSMEG_2351 | Coenzyme A transferase, subunit B. | Electron transfer flavoprotein, beta subunit; Identified by similarity to SP:O85691; match to protein family HMM PF01012. | 0.402 |
| ABK73925.1 | ABK73153.1 | MSMEG_5258 | MSMEG_6003 | Steroid delta-isomerase; Identified by match to protein family HMM PF02136. | Coenzyme A transferase, subunit B. | 0.633 |
| ABK73925.1 | ABK74969.1 | MSMEG_5258 | MSMEG_6001 | Steroid delta-isomerase; Identified by match to protein family HMM PF02136. | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | 0.420 |
| ABK73925.1 | ABK75868.1 | MSMEG_5258 | MSMEG_0636 | Steroid delta-isomerase; Identified by match to protein family HMM PF02136. | Conserved hypothetical protein. | 0.680 |
| ABK73925.1 | ABK76051.1 | MSMEG_5258 | MSMEG_1645 | Steroid delta-isomerase; Identified by match to protein family HMM PF02136. | NADH:flavin oxidoreductase/nadh oxidase; Identified by match to protein family HMM PF00724. | 0.517 |
| ABK73925.1 | pcaC-6 | MSMEG_5258 | MSMEG_5856 | Steroid delta-isomerase; Identified by match to protein family HMM PF02136. | 4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627. | 0.425 |
| ABK74361.1 | ABK76051.1 | MSMEG_6603 | MSMEG_1645 | NADH:flavin oxidoreductase/nadh oxidase. | NADH:flavin oxidoreductase/nadh oxidase; Identified by match to protein family HMM PF00724. | 0.826 |
| ABK74969.1 | ABK73153.1 | MSMEG_6001 | MSMEG_6003 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | Coenzyme A transferase, subunit B. | 0.995 |
| ABK74969.1 | ABK73925.1 | MSMEG_6001 | MSMEG_5258 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | Steroid delta-isomerase; Identified by match to protein family HMM PF02136. | 0.420 |
| ABK74969.1 | ABK75868.1 | MSMEG_6001 | MSMEG_0636 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | Conserved hypothetical protein. | 0.568 |
| ABK74969.1 | ABK76051.1 | MSMEG_6001 | MSMEG_1645 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | NADH:flavin oxidoreductase/nadh oxidase; Identified by match to protein family HMM PF00724. | 0.443 |
| ABK74969.1 | etfB | MSMEG_6001 | MSMEG_2351 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | Electron transfer flavoprotein, beta subunit; Identified by similarity to SP:O85691; match to protein family HMM PF01012. | 0.454 |
| ABK75868.1 | ABK73153.1 | MSMEG_0636 | MSMEG_6003 | Conserved hypothetical protein. | Coenzyme A transferase, subunit B. | 0.670 |
| ABK75868.1 | ABK73925.1 | MSMEG_0636 | MSMEG_5258 | Conserved hypothetical protein. | Steroid delta-isomerase; Identified by match to protein family HMM PF02136. | 0.680 |
page 1 of 3