STRINGSTRING
ABK70939.1 ABK70939.1 ABK75680.1 ABK75680.1 ABK74324.1 ABK74324.1 ABK76086.1 ABK76086.1 ABK75431.1 ABK75431.1 narH narH ABK75176.1 ABK75176.1 narI narI ABK69527.1 ABK69527.1 ABK73400.1 ABK73400.1 nirB nirB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ABK70939.1Oxidoreductase, 2-nitropropane dioxygenase family protein; Identified by match to protein family HMM PF03060. (289 aa)    
Predicted Functional Partners:
ABK75680.1
2-nitropropane dioxygenase, NPD; Identified by match to protein family HMM PF03060.
  
 
 
0.929
ABK74324.1
Oxidoreductase; Identified by match to protein family HMM PF03060.
  
 
 
0.928
ABK76086.1
Nitrite extrusion protein; Identified by match to protein family HMM PF07690.
  
 
 0.913
ABK75431.1
Nitrate/nitrite transporter protein; Identified by match to protein family HMM PF07690.
  
 
 0.913
narH
Nitrate reductase, beta subunit; Identified by match to protein family HMM TIGR01660.
  
 
  0.904
ABK75176.1
Nitrate reductase, alpha subunit; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01580; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
  0.904
narI
Respiratory nitrate reductase, gamma subunit; Identified by match to protein family HMM PF02665; match to protein family HMM TIGR00351.
    
  0.903
ABK69527.1
Nitrite reductase [NAD(P)H] small subunit.
  
 
  0.902
ABK73400.1
Rieske [2Fe-2S] domain protein; Identified by match to protein family HMM PF00355.
  
 
  0.902
nirB
Nitrite reductase [NAD(P)H], large subunit; Identified by match to protein family HMM PF00070; match to protein family HMM PF01077; match to protein family HMM PF03460; match to protein family HMM PF04324; match to protein family HMM PF07992; match to protein family HMM TIGR02374; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
 
  0.901
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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