Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70439.1 | ABK72316.1 | MSMEG_4687 | MSMEG_1675 | Cytosine deaminase; Identified by match to protein family HMM PF00383. | Pyrimidine-nucleoside phosphorylase; Identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644. | 0.900 |
| ABK70439.1 | ABK72550.1 | MSMEG_4687 | MSMEG_1701 | Cytosine deaminase; Identified by match to protein family HMM PF00383. | Purine nucleotide phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.911 |
| ABK70439.1 | cdd | MSMEG_4687 | MSMEG_1673 | Cytosine deaminase; Identified by match to protein family HMM PF00383. | Cytidine deaminase; Identified by match to protein family HMM PF00383; match to protein family HMM TIGR01354. | 0.853 |
| ABK70439.1 | pyrR | MSMEG_4687 | MSMEG_3042 | Cytosine deaminase; Identified by match to protein family HMM PF00383. | PyrR bifunctional protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.905 |
| ABK70439.1 | upp | MSMEG_4687 | MSMEG_1694 | Cytosine deaminase; Identified by match to protein family HMM PF00383. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.980 |
| ABK70439.1 | upp-2 | MSMEG_4687 | MSMEG_3473 | Cytosine deaminase; Identified by match to protein family HMM PF00383. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.980 |
| ABK72316.1 | ABK70439.1 | MSMEG_1675 | MSMEG_4687 | Pyrimidine-nucleoside phosphorylase; Identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644. | Cytosine deaminase; Identified by match to protein family HMM PF00383. | 0.900 |
| ABK72316.1 | ABK72550.1 | MSMEG_1675 | MSMEG_1701 | Pyrimidine-nucleoside phosphorylase; Identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644. | Purine nucleotide phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.974 |
| ABK72316.1 | cdd | MSMEG_1675 | MSMEG_1673 | Pyrimidine-nucleoside phosphorylase; Identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644. | Cytidine deaminase; Identified by match to protein family HMM PF00383; match to protein family HMM TIGR01354. | 0.998 |
| ABK72316.1 | pyrR | MSMEG_1675 | MSMEG_3042 | Pyrimidine-nucleoside phosphorylase; Identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644. | PyrR bifunctional protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.918 |
| ABK72316.1 | surE | MSMEG_1675 | MSMEG_6820 | Pyrimidine-nucleoside phosphorylase; Identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644. | Acid phosphatase SurE; Identified by match to protein family HMM PF01975; match to protein family HMM TIGR00087. | 0.928 |
| ABK72316.1 | upp | MSMEG_1675 | MSMEG_1694 | Pyrimidine-nucleoside phosphorylase; Identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.979 |
| ABK72316.1 | upp-2 | MSMEG_1675 | MSMEG_3473 | Pyrimidine-nucleoside phosphorylase; Identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.964 |
| ABK72550.1 | ABK70439.1 | MSMEG_1701 | MSMEG_4687 | Purine nucleotide phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Cytosine deaminase; Identified by match to protein family HMM PF00383. | 0.911 |
| ABK72550.1 | ABK72316.1 | MSMEG_1701 | MSMEG_1675 | Purine nucleotide phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Pyrimidine-nucleoside phosphorylase; Identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644. | 0.974 |
| ABK72550.1 | cdd | MSMEG_1701 | MSMEG_1673 | Purine nucleotide phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Cytidine deaminase; Identified by match to protein family HMM PF00383; match to protein family HMM TIGR01354. | 0.975 |
| ABK72550.1 | pyrR | MSMEG_1701 | MSMEG_3042 | Purine nucleotide phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | PyrR bifunctional protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.906 |
| ABK72550.1 | surE | MSMEG_1701 | MSMEG_6820 | Purine nucleotide phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Acid phosphatase SurE; Identified by match to protein family HMM PF01975; match to protein family HMM TIGR00087. | 0.909 |
| ABK72550.1 | upp | MSMEG_1701 | MSMEG_1694 | Purine nucleotide phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.940 |
| ABK72550.1 | upp-2 | MSMEG_1701 | MSMEG_3473 | Purine nucleotide phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.926 |
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