Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70791.1 | ABK71263.1 | MSMEG_1703 | MSMEG_1706 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. | Xylose transport system permease protein XylH; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.406 |
| ABK70791.1 | ABK71343.1 | MSMEG_1703 | MSMEG_1702 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; Belongs to the peptidase M20A family. | 0.889 |
| ABK70791.1 | ABK72000.1 | MSMEG_1703 | MSMEG_1705 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. | D-xylose transport ATP-binding protein XylG; Identified by match to protein family HMM PF00005. | 0.861 |
| ABK70791.1 | ABK72550.1 | MSMEG_1703 | MSMEG_1701 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. | Purine nucleotide phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.907 |
| ABK70791.1 | ABK76012.1 | MSMEG_1703 | MSMEG_1704 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. | ABC transporter. | 0.744 |
| ABK70791.1 | dapD | MSMEG_1703 | MSMEG_5104 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. | Tetrahydropicolinate succinylase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA. | 0.456 |
| ABK71263.1 | ABK70791.1 | MSMEG_1706 | MSMEG_1703 | Xylose transport system permease protein XylH; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. | 0.406 |
| ABK71263.1 | ABK71343.1 | MSMEG_1706 | MSMEG_1702 | Xylose transport system permease protein XylH; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; Belongs to the peptidase M20A family. | 0.414 |
| ABK71263.1 | ABK72000.1 | MSMEG_1706 | MSMEG_1705 | Xylose transport system permease protein XylH; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | D-xylose transport ATP-binding protein XylG; Identified by match to protein family HMM PF00005. | 0.958 |
| ABK71263.1 | ABK76012.1 | MSMEG_1706 | MSMEG_1704 | Xylose transport system permease protein XylH; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | ABC transporter. | 0.973 |
| ABK71343.1 | ABK70791.1 | MSMEG_1702 | MSMEG_1703 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; Belongs to the peptidase M20A family. | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. | 0.889 |
| ABK71343.1 | ABK71263.1 | MSMEG_1702 | MSMEG_1706 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; Belongs to the peptidase M20A family. | Xylose transport system permease protein XylH; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.414 |
| ABK71343.1 | ABK72000.1 | MSMEG_1702 | MSMEG_1705 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; Belongs to the peptidase M20A family. | D-xylose transport ATP-binding protein XylG; Identified by match to protein family HMM PF00005. | 0.418 |
| ABK71343.1 | ABK72550.1 | MSMEG_1702 | MSMEG_1701 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; Belongs to the peptidase M20A family. | Purine nucleotide phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.623 |
| ABK71343.1 | ABK75044.1 | MSMEG_1702 | MSMEG_2521 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; Belongs to the peptidase M20A family. | Amidase; Identified by match to protein family HMM PF01425; Belongs to the amidase family. | 0.414 |
| ABK71343.1 | ABK76012.1 | MSMEG_1702 | MSMEG_1704 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; Belongs to the peptidase M20A family. | ABC transporter. | 0.417 |
| ABK71343.1 | dapD | MSMEG_1702 | MSMEG_5104 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; Belongs to the peptidase M20A family. | Tetrahydropicolinate succinylase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA. | 0.457 |
| ABK72000.1 | ABK70791.1 | MSMEG_1705 | MSMEG_1703 | D-xylose transport ATP-binding protein XylG; Identified by match to protein family HMM PF00005. | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. | 0.861 |
| ABK72000.1 | ABK71263.1 | MSMEG_1705 | MSMEG_1706 | D-xylose transport ATP-binding protein XylG; Identified by match to protein family HMM PF00005. | Xylose transport system permease protein XylH; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.958 |
| ABK72000.1 | ABK71343.1 | MSMEG_1705 | MSMEG_1702 | D-xylose transport ATP-binding protein XylG; Identified by match to protein family HMM PF00005. | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; Belongs to the peptidase M20A family. | 0.418 |
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