Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69858.1 | ABK70791.1 | MSMEG_3635 | MSMEG_1703 | iron(III)-transport system permease protein SfuB; Identified by match to protein family HMM PF00528. | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. | 0.761 |
| ABK69858.1 | ABK72000.1 | MSMEG_3635 | MSMEG_1705 | iron(III)-transport system permease protein SfuB; Identified by match to protein family HMM PF00528. | D-xylose transport ATP-binding protein XylG; Identified by match to protein family HMM PF00005. | 0.763 |
| ABK69858.1 | ABK72550.1 | MSMEG_3635 | MSMEG_1701 | iron(III)-transport system permease protein SfuB; Identified by match to protein family HMM PF00528. | Purine nucleotide phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.590 |
| ABK69858.1 | ABK73371.1 | MSMEG_3635 | MSMEG_5420 | iron(III)-transport system permease protein SfuB; Identified by match to protein family HMM PF00528. | Tat-translocated enzyme; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | 0.771 |
| ABK69858.1 | ABK75662.1 | MSMEG_3635 | MSMEG_3636 | iron(III)-transport system permease protein SfuB; Identified by match to protein family HMM PF00528. | Ferric iron-binding periplasmic protein of ABC transporter; Identified by match to protein family HMM PF01547. | 0.998 |
| ABK69858.1 | ABK75798.1 | MSMEG_3635 | MSMEG_5418 | iron(III)-transport system permease protein SfuB; Identified by match to protein family HMM PF00528. | Iron permease FTR1; Identified by match to protein family HMM PF03239. | 0.739 |
| ABK69858.1 | ABK75924.1 | MSMEG_3635 | MSMEG_1712 | iron(III)-transport system permease protein SfuB; Identified by match to protein family HMM PF00528. | ABC transporter periplasmic-binding protein YtfQ; Identified by match to protein family HMM PF00532. | 0.601 |
| ABK69858.1 | ABK76012.1 | MSMEG_3635 | MSMEG_1704 | iron(III)-transport system permease protein SfuB; Identified by match to protein family HMM PF00528. | ABC transporter. | 0.529 |
| ABK70791.1 | ABK69858.1 | MSMEG_1703 | MSMEG_3635 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. | iron(III)-transport system permease protein SfuB; Identified by match to protein family HMM PF00528. | 0.761 |
| ABK70791.1 | ABK71343.1 | MSMEG_1703 | MSMEG_1702 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; Belongs to the peptidase M20A family. | 0.889 |
| ABK70791.1 | ABK72000.1 | MSMEG_1703 | MSMEG_1705 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. | D-xylose transport ATP-binding protein XylG; Identified by match to protein family HMM PF00005. | 0.861 |
| ABK70791.1 | ABK72550.1 | MSMEG_1703 | MSMEG_1701 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. | Purine nucleotide phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.907 |
| ABK70791.1 | ABK73371.1 | MSMEG_1703 | MSMEG_5420 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. | Tat-translocated enzyme; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | 0.760 |
| ABK70791.1 | ABK74234.1 | MSMEG_1703 | MSMEG_1695 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. | Phosphoglucomutase/phosphomannomutase; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880. | 0.560 |
| ABK70791.1 | ABK75662.1 | MSMEG_1703 | MSMEG_3636 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. | Ferric iron-binding periplasmic protein of ABC transporter; Identified by match to protein family HMM PF01547. | 0.608 |
| ABK70791.1 | ABK75798.1 | MSMEG_1703 | MSMEG_5418 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. | Iron permease FTR1; Identified by match to protein family HMM PF03239. | 0.521 |
| ABK70791.1 | ABK75924.1 | MSMEG_1703 | MSMEG_1712 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. | ABC transporter periplasmic-binding protein YtfQ; Identified by match to protein family HMM PF00532. | 0.690 |
| ABK70791.1 | ABK76012.1 | MSMEG_1703 | MSMEG_1704 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. | ABC transporter. | 0.744 |
| ABK71343.1 | ABK70791.1 | MSMEG_1702 | MSMEG_1703 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; Belongs to the peptidase M20A family. | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891. | 0.889 |
| ABK71343.1 | ABK72000.1 | MSMEG_1702 | MSMEG_1705 | Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; Belongs to the peptidase M20A family. | D-xylose transport ATP-binding protein XylG; Identified by match to protein family HMM PF00005. | 0.418 |
page 1 of 4