STRINGSTRING
ABK75059.1 ABK75059.1 ABK71447.1 ABK71447.1 ABK74570.1 ABK74570.1 ABK75395.1 ABK75395.1 ABK70220.1 ABK70220.1 ABK75434.1 ABK75434.1 ABK71710.1 ABK71710.1 ABK75924.1 ABK75924.1 ABK75641.1 ABK75641.1 ABK69574.1 ABK69574.1 ABK70730.1 ABK70730.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75059.1Phosphatase YfbT; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509. (219 aa)    
Predicted Functional Partners:
ABK71447.1
D-mannonate oxidoreductase; Identified by match to protein family HMM PF01232; match to protein family HMM PF08125.
  
 
 0.911
ABK74570.1
Ribose operon repressor, putative; Identified by similarity to SP:P03023; match to protein family HMM PF00356; match to protein family HMM PF00532.
 
  
 0.826
ABK75395.1
Conserved hypothetical protein.
  
    0.747
ABK70220.1
Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
  
    0.721
ABK75434.1
ATP binding protein of ABC transporter; Identified by match to protein family HMM PF00005.
  
    0.720
ABK71710.1
Inner membrane ABC transporter permease protein YjfF; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
  
    0.719
ABK75924.1
ABC transporter periplasmic-binding protein YtfQ; Identified by match to protein family HMM PF00532.
  
    0.661
ABK75641.1
Identified by match to protein family HMM PF00614.
  
 
 0.463
ABK69574.1
Efflux membrane protein; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily.
  
  
 0.462
ABK70730.1
Transketolase, central region; Identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM PF02780.
  
  
 0.445
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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