STRINGSTRING
ABK75434.1 ABK75434.1 ABK75924.1 ABK75924.1 ABK71710.1 ABK71710.1 ABK70220.1 ABK70220.1 ABK74237.1 ABK74237.1 ABK75223.1 ABK75223.1 ABK72360.1 ABK72360.1 ABK69646.1 ABK69646.1 ABK73292.1 ABK73292.1 ABK71867.1 ABK71867.1 ABK70633.1 ABK70633.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75434.1ATP binding protein of ABC transporter; Identified by match to protein family HMM PF00005. (502 aa)    
Predicted Functional Partners:
ABK75924.1
ABC transporter periplasmic-binding protein YtfQ; Identified by match to protein family HMM PF00532.
 
 0.998
ABK71710.1
Inner membrane ABC transporter permease protein YjfF; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 0.994
ABK70220.1
Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 0.994
ABK74237.1
Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 0.888
ABK75223.1
Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 0.887
ABK72360.1
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 0.882
ABK69646.1
D-ribose-binding periplasmic protein RbsB; Identified by match to protein family HMM PF00532.
 
 
 0.878
ABK73292.1
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 0.876
ABK71867.1
Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 0.876
ABK70633.1
D-ribose-binding periplasmic protein; Identified by match to protein family HMM PF00532.
 
 
 0.875
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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