Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69767.1 | ABK72756.1 | MSMEG_5265 | MSMEG_1734 | Putative cystathionine gamma-synthase; Identified by match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212. | Conserved hypothetical protein. | 0.483 |
ABK70819.1 | ABK72756.1 | MSMEG_1736 | MSMEG_1734 | Glycerol-3-phosphate dehydrogenase 2; Identified by match to protein family HMM PF01266; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Conserved hypothetical protein. | 0.576 |
ABK70819.1 | ABK75315.1 | MSMEG_1736 | MSMEG_1735 | Glycerol-3-phosphate dehydrogenase 2; Identified by match to protein family HMM PF01266; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Dihydrolipoamide dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992. | 0.856 |
ABK70819.1 | ABK75687.1 | MSMEG_1736 | MSMEG_1737 | Glycerol-3-phosphate dehydrogenase 2; Identified by match to protein family HMM PF01266; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | RNA pseudouridine synthase family protein; Identified by match to protein family HMM PF00849. | 0.829 |
ABK70882.1 | ABK71394.1 | MSMEG_5790 | MSMEG_1884 | SseC protein; Identified by match to protein family HMM PF07210. | Conserved hypothetical protein. | 0.528 |
ABK70882.1 | ABK71592.1 | MSMEG_5790 | MSMEG_6936 | SseC protein; Identified by match to protein family HMM PF07210. | Conserved hypothetical protein. | 0.541 |
ABK70882.1 | ABK72334.1 | MSMEG_5790 | MSMEG_1601 | SseC protein; Identified by match to protein family HMM PF07210. | Conserved hypothetical protein. | 0.438 |
ABK70882.1 | ABK72756.1 | MSMEG_5790 | MSMEG_1734 | SseC protein; Identified by match to protein family HMM PF07210. | Conserved hypothetical protein. | 0.675 |
ABK70882.1 | ABK75490.1 | MSMEG_5790 | MSMEG_4909 | SseC protein; Identified by match to protein family HMM PF07210. | Conserved hypothetical protein. | 0.536 |
ABK71394.1 | ABK70882.1 | MSMEG_1884 | MSMEG_5790 | Conserved hypothetical protein. | SseC protein; Identified by match to protein family HMM PF07210. | 0.528 |
ABK71394.1 | ABK71592.1 | MSMEG_1884 | MSMEG_6936 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.521 |
ABK71394.1 | ABK72334.1 | MSMEG_1884 | MSMEG_1601 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.720 |
ABK71394.1 | ABK72756.1 | MSMEG_1884 | MSMEG_1734 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.682 |
ABK71394.1 | ABK75490.1 | MSMEG_1884 | MSMEG_4909 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.716 |
ABK71592.1 | ABK70882.1 | MSMEG_6936 | MSMEG_5790 | Conserved hypothetical protein. | SseC protein; Identified by match to protein family HMM PF07210. | 0.541 |
ABK71592.1 | ABK71394.1 | MSMEG_6936 | MSMEG_1884 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.521 |
ABK71592.1 | ABK72334.1 | MSMEG_6936 | MSMEG_1601 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.419 |
ABK71592.1 | ABK72756.1 | MSMEG_6936 | MSMEG_1734 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.678 |
ABK71592.1 | ABK75490.1 | MSMEG_6936 | MSMEG_4909 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.589 |
ABK72176.1 | ABK72756.1 | MSMEG_1540 | MSMEG_1734 | ATP-dependent RNA helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | Conserved hypothetical protein. | 0.754 |
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