Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69549.1 | ABK70996.1 | MSMEG_1765 | MSMEG_1767 | Identified by match to protein family HMM PF04471. | Conserved hypothetical protein. | 0.528 |
ABK69549.1 | ABK72093.1 | MSMEG_1765 | MSMEG_0855 | Identified by match to protein family HMM PF04471. | Conserved hypothetical protein; Identified by match to protein family HMM PF08044. | 0.461 |
ABK69549.1 | ABK72764.1 | MSMEG_1765 | MSMEG_1517 | Identified by match to protein family HMM PF04471. | Spfh domain/band 7 family protein, putative; Identified by match to protein family HMM PF01145. | 0.501 |
ABK69549.1 | ABK74621.1 | MSMEG_1765 | MSMEG_5845 | Identified by match to protein family HMM PF04471. | Putative C4-dicarboxylate transporter. | 0.488 |
ABK69549.1 | ABK74834.1 | MSMEG_1765 | MSMEG_1768 | Identified by match to protein family HMM PF04471. | Conserved hypothetical protein. | 0.524 |
ABK69549.1 | ABK75073.1 | MSMEG_1765 | MSMEG_2381 | Identified by match to protein family HMM PF04471. | Conserved hypothetical protein. | 0.429 |
ABK69549.1 | ABK75522.1 | MSMEG_1765 | MSMEG_3570 | Identified by match to protein family HMM PF04471. | Conserved hypothetical protein; Identified by match to protein family HMM PF05976. | 0.471 |
ABK69549.1 | ABK75772.1 | MSMEG_1765 | MSMEG_5151 | Identified by match to protein family HMM PF04471. | Conserved hypothetical protein. | 0.673 |
ABK69549.1 | ABK76032.1 | MSMEG_1765 | MSMEG_1195 | Identified by match to protein family HMM PF04471. | Conserved hypothetical protein. | 0.664 |
ABK69549.1 | ABK76179.1 | MSMEG_1765 | MSMEG_1766 | Identified by match to protein family HMM PF04471. | Conserved hypothetical protein. | 0.549 |
ABK70996.1 | ABK69549.1 | MSMEG_1767 | MSMEG_1765 | Conserved hypothetical protein. | Identified by match to protein family HMM PF04471. | 0.528 |
ABK70996.1 | ABK74834.1 | MSMEG_1767 | MSMEG_1768 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.847 |
ABK70996.1 | ABK76179.1 | MSMEG_1767 | MSMEG_1766 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.774 |
ABK72093.1 | ABK69549.1 | MSMEG_0855 | MSMEG_1765 | Conserved hypothetical protein; Identified by match to protein family HMM PF08044. | Identified by match to protein family HMM PF04471. | 0.461 |
ABK72093.1 | ABK74621.1 | MSMEG_0855 | MSMEG_5845 | Conserved hypothetical protein; Identified by match to protein family HMM PF08044. | Putative C4-dicarboxylate transporter. | 0.540 |
ABK72093.1 | ABK75772.1 | MSMEG_0855 | MSMEG_5151 | Conserved hypothetical protein; Identified by match to protein family HMM PF08044. | Conserved hypothetical protein. | 0.558 |
ABK72093.1 | ABK76032.1 | MSMEG_0855 | MSMEG_1195 | Conserved hypothetical protein; Identified by match to protein family HMM PF08044. | Conserved hypothetical protein. | 0.486 |
ABK72764.1 | ABK69549.1 | MSMEG_1517 | MSMEG_1765 | Spfh domain/band 7 family protein, putative; Identified by match to protein family HMM PF01145. | Identified by match to protein family HMM PF04471. | 0.501 |
ABK72764.1 | ABK76032.1 | MSMEG_1517 | MSMEG_1195 | Spfh domain/band 7 family protein, putative; Identified by match to protein family HMM PF01145. | Conserved hypothetical protein. | 0.402 |
ABK74621.1 | ABK69549.1 | MSMEG_5845 | MSMEG_1765 | Putative C4-dicarboxylate transporter. | Identified by match to protein family HMM PF04471. | 0.488 |
page 1 of 3