Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69658.1 | ABK71220.1 | MSMEG_6130 | MSMEG_1803 | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | RsbW protein. | 0.818 |
ABK69658.1 | ABK71286.1 | MSMEG_6130 | MSMEG_1787 | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | RsbW protein. | 0.857 |
ABK69658.1 | ABK72665.1 | MSMEG_6130 | MSMEG_1804 | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | RNA polymerase sigma-F factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; match to protein family HMM TIGR02980; Belongs to the sigma-70 factor family. | 0.868 |
ABK69658.1 | ABK72815.1 | MSMEG_6130 | MSMEG_6129 | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | Conserved hypothetical protein. | 0.875 |
ABK69658.1 | ABK73163.1 | MSMEG_6130 | MSMEG_6127 | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. | 0.675 |
ABK69658.1 | ABK74824.1 | MSMEG_6130 | MSMEG_1786 | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | Stas domain, putative; Identified by match to protein family HMM PF01740. | 0.634 |
ABK69658.1 | ABK75635.1 | MSMEG_6130 | MSMEG_5551 | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | Stas domain protein; Identified by match to protein family HMM PF01740. | 0.737 |
ABK69658.1 | ABK76188.1 | MSMEG_6130 | MSMEG_6131 | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | Magnesium or manganese-dependent protein phosphatase; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228. | 0.996 |
ABK71220.1 | ABK69658.1 | MSMEG_1803 | MSMEG_6130 | RsbW protein. | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | 0.818 |
ABK71220.1 | ABK72665.1 | MSMEG_1803 | MSMEG_1804 | RsbW protein. | RNA polymerase sigma-F factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; match to protein family HMM TIGR02980; Belongs to the sigma-70 factor family. | 0.998 |
ABK71220.1 | ABK72815.1 | MSMEG_1803 | MSMEG_6129 | RsbW protein. | Conserved hypothetical protein. | 0.598 |
ABK71220.1 | ABK73163.1 | MSMEG_1803 | MSMEG_6127 | RsbW protein. | Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. | 0.939 |
ABK71220.1 | ABK74824.1 | MSMEG_1803 | MSMEG_1786 | RsbW protein. | Stas domain, putative; Identified by match to protein family HMM PF01740. | 0.937 |
ABK71220.1 | ABK75635.1 | MSMEG_1803 | MSMEG_5551 | RsbW protein. | Stas domain protein; Identified by match to protein family HMM PF01740. | 0.440 |
ABK71220.1 | ABK76188.1 | MSMEG_1803 | MSMEG_6131 | RsbW protein. | Magnesium or manganese-dependent protein phosphatase; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228. | 0.946 |
ABK71220.1 | FbiC | MSMEG_1803 | MSMEG_5126 | RsbW protein. | FO synthase; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR00423. | 0.783 |
ABK71286.1 | ABK69658.1 | MSMEG_1787 | MSMEG_6130 | RsbW protein. | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | 0.857 |
ABK71286.1 | ABK72665.1 | MSMEG_1787 | MSMEG_1804 | RsbW protein. | RNA polymerase sigma-F factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; match to protein family HMM TIGR02980; Belongs to the sigma-70 factor family. | 0.893 |
ABK71286.1 | ABK72815.1 | MSMEG_1787 | MSMEG_6129 | RsbW protein. | Conserved hypothetical protein. | 0.596 |
ABK71286.1 | ABK73163.1 | MSMEG_1787 | MSMEG_6127 | RsbW protein. | Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. | 0.854 |
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