STRINGSTRING
ABK70971.1 ABK70971.1 ABK69954.1 ABK69954.1 ABK70483.1 ABK70483.1 ABK72654.1 ABK72654.1 ABK70373.1 ABK70373.1 ABK70017.1 ABK70017.1 ABK70583.1 ABK70583.1 ABK72371.1 ABK72371.1 ABK76052.1 ABK76052.1 ABK72024.1 ABK72024.1 ABK75641.1 ABK75641.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70971.1Conserved hypothetical protein. (84 aa)    
Predicted Functional Partners:
ABK69954.1
Conserved hypothetical protein.
 
    0.876
ABK70483.1
Conserved hypothetical protein.
  
    0.670
ABK72654.1
DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
  
    0.540
ABK70373.1
Conserved hypothetical protein.
  
    0.521
ABK70017.1
RDD family protein, putative; Identified by match to protein family HMM PF06271.
  
    0.488
ABK70583.1
Conserved hypothetical protein.
  
     0.481
ABK72371.1
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
  
    0.473
ABK76052.1
Identified by match to protein family HMM TIGR01409.
  
    0.458
ABK72024.1
Flavin-type hydroxylase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494.
  
    0.436
ABK75641.1
Identified by match to protein family HMM PF00614.
  
    0.433
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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