STRINGSTRING
ABK72562.1 ABK72562.1 ABK74674.1 ABK74674.1 ABK73853.1 ABK73853.1 ABK71722.1 ABK71722.1 ABK72700.1 ABK72700.1 ABK72895.1 ABK72895.1 ABK75649.1 ABK75649.1 ABK73168.1 ABK73168.1 ABK72482.1 ABK72482.1 ABK74167.1 ABK74167.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72562.1Membrane protein. (187 aa)    
Predicted Functional Partners:
ABK74674.1
DoxX subfamily protein, putative; Identified by match to protein family HMM PF07681.
 
    0.604
ABK73853.1
Putative transcriptional regulator; Identified by match to protein family HMM PF00440.
  
    0.541
ABK71722.1
Identified by match to protein family HMM PF01266.
  
    0.506
ABK72700.1
2-deoxy-scyllo-inosamine dehydrogenase; Identified by match to protein family HMM PF00107.
  
    0.495
ABK72895.1
Salicylate esterase; Identified by match to protein family HMM PF00561.
  
    0.495
ABK75649.1
Major facilitator superfamily protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
  
    0.492
ABK73168.1
Dehydrogenase; Identified by match to protein family HMM PF00296.
 
    0.483
ABK72482.1
Conserved hypothetical protein.
  
    0.406
ABK74167.1
Conserved hypothetical protein TIGR00026; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026.
  
    0.404
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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