Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK71722.1 | ABK72562.1 | MSMEG_1796 | MSMEG_1793 | Identified by match to protein family HMM PF01266. | Membrane protein. | 0.506 |
ABK71722.1 | ABK72700.1 | MSMEG_1796 | MSMEG_1795 | Identified by match to protein family HMM PF01266. | 2-deoxy-scyllo-inosamine dehydrogenase; Identified by match to protein family HMM PF00107. | 0.828 |
ABK71722.1 | ABK72895.1 | MSMEG_1796 | MSMEG_1797 | Identified by match to protein family HMM PF01266. | Salicylate esterase; Identified by match to protein family HMM PF00561. | 0.816 |
ABK71722.1 | ABK75649.1 | MSMEG_1796 | MSMEG_1798 | Identified by match to protein family HMM PF01266. | Major facilitator superfamily protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.785 |
ABK72482.1 | ABK72562.1 | MSMEG_2998 | MSMEG_1793 | Conserved hypothetical protein. | Membrane protein. | 0.406 |
ABK72562.1 | ABK71722.1 | MSMEG_1793 | MSMEG_1796 | Membrane protein. | Identified by match to protein family HMM PF01266. | 0.506 |
ABK72562.1 | ABK72482.1 | MSMEG_1793 | MSMEG_2998 | Membrane protein. | Conserved hypothetical protein. | 0.406 |
ABK72562.1 | ABK72700.1 | MSMEG_1793 | MSMEG_1795 | Membrane protein. | 2-deoxy-scyllo-inosamine dehydrogenase; Identified by match to protein family HMM PF00107. | 0.495 |
ABK72562.1 | ABK72895.1 | MSMEG_1793 | MSMEG_1797 | Membrane protein. | Salicylate esterase; Identified by match to protein family HMM PF00561. | 0.495 |
ABK72562.1 | ABK73168.1 | MSMEG_1793 | MSMEG_1794 | Membrane protein. | Dehydrogenase; Identified by match to protein family HMM PF00296. | 0.483 |
ABK72562.1 | ABK73853.1 | MSMEG_1793 | MSMEG_6479 | Membrane protein. | Putative transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.541 |
ABK72562.1 | ABK74167.1 | MSMEG_1793 | MSMEG_3004 | Membrane protein. | Conserved hypothetical protein TIGR00026; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.404 |
ABK72562.1 | ABK74674.1 | MSMEG_1793 | MSMEG_3255 | Membrane protein. | DoxX subfamily protein, putative; Identified by match to protein family HMM PF07681. | 0.604 |
ABK72562.1 | ABK75649.1 | MSMEG_1793 | MSMEG_1798 | Membrane protein. | Major facilitator superfamily protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.492 |
ABK72700.1 | ABK71722.1 | MSMEG_1795 | MSMEG_1796 | 2-deoxy-scyllo-inosamine dehydrogenase; Identified by match to protein family HMM PF00107. | Identified by match to protein family HMM PF01266. | 0.828 |
ABK72700.1 | ABK72562.1 | MSMEG_1795 | MSMEG_1793 | 2-deoxy-scyllo-inosamine dehydrogenase; Identified by match to protein family HMM PF00107. | Membrane protein. | 0.495 |
ABK72700.1 | ABK72895.1 | MSMEG_1795 | MSMEG_1797 | 2-deoxy-scyllo-inosamine dehydrogenase; Identified by match to protein family HMM PF00107. | Salicylate esterase; Identified by match to protein family HMM PF00561. | 0.791 |
ABK72700.1 | ABK75649.1 | MSMEG_1795 | MSMEG_1798 | 2-deoxy-scyllo-inosamine dehydrogenase; Identified by match to protein family HMM PF00107. | Major facilitator superfamily protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.784 |
ABK72895.1 | ABK71722.1 | MSMEG_1797 | MSMEG_1796 | Salicylate esterase; Identified by match to protein family HMM PF00561. | Identified by match to protein family HMM PF01266. | 0.816 |
ABK72895.1 | ABK72562.1 | MSMEG_1797 | MSMEG_1793 | Salicylate esterase; Identified by match to protein family HMM PF00561. | Membrane protein. | 0.495 |
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