STRINGSTRING
ABK73168.1 ABK73168.1 ABK72625.1 ABK72625.1 cofD cofD ABK70329.1 ABK70329.1 ABK71916.1 ABK71916.1 ABK76236.1 ABK76236.1 ABK69720.1 ABK69720.1 ABK71452.1 ABK71452.1 ABK74167.1 ABK74167.1 ABK73624.1 ABK73624.1 fbiD fbiD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73168.1Dehydrogenase; Identified by match to protein family HMM PF00296. (335 aa)    
Predicted Functional Partners:
ABK72625.1
Dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593.
  
  
 0.835
cofD
Lppg:fo 2-phospho-l-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP.
 
  
 0.797
ABK70329.1
Dehydrogenase DhgA; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
  
  
 0.797
ABK71916.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026.
  
  
 0.797
ABK76236.1
MmcI protein.
  
  
 0.744
ABK69720.1
Conserved hypothetical protein.
  
  
 0.741
ABK71452.1
MmcI protein.
  
   
 0.740
ABK74167.1
Conserved hypothetical protein TIGR00026; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026.
  
  
 0.739
ABK73624.1
Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026.
  
  
 0.725
fbiD
Conserved hypothetical protein; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family.
 
  
 0.711
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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