Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69720.1 | ABK71916.1 | MSMEG_2906 | MSMEG_5998 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.767 |
ABK69720.1 | ABK73168.1 | MSMEG_2906 | MSMEG_1794 | Conserved hypothetical protein. | Dehydrogenase; Identified by match to protein family HMM PF00296. | 0.741 |
ABK69720.1 | ABK73624.1 | MSMEG_2906 | MSMEG_2850 | Conserved hypothetical protein. | Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.766 |
ABK69720.1 | ABK74167.1 | MSMEG_2906 | MSMEG_3004 | Conserved hypothetical protein. | Conserved hypothetical protein TIGR00026; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.765 |
ABK69720.1 | cofD | MSMEG_2906 | MSMEG_1830 | Conserved hypothetical protein. | Lppg:fo 2-phospho-l-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP. | 0.713 |
ABK69720.1 | fbiD | MSMEG_2906 | MSMEG_2392 | Conserved hypothetical protein. | Conserved hypothetical protein; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family. | 0.574 |
ABK70329.1 | ABK72625.1 | MSMEG_5402 | MSMEG_5400 | Dehydrogenase DhgA; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | Dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593. | 0.953 |
ABK70329.1 | ABK73168.1 | MSMEG_5402 | MSMEG_1794 | Dehydrogenase DhgA; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | Dehydrogenase; Identified by match to protein family HMM PF00296. | 0.797 |
ABK71452.1 | ABK71916.1 | MSMEG_2904 | MSMEG_5998 | MmcI protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.769 |
ABK71452.1 | ABK73168.1 | MSMEG_2904 | MSMEG_1794 | MmcI protein. | Dehydrogenase; Identified by match to protein family HMM PF00296. | 0.740 |
ABK71452.1 | ABK73624.1 | MSMEG_2904 | MSMEG_2850 | MmcI protein. | Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.764 |
ABK71452.1 | ABK74167.1 | MSMEG_2904 | MSMEG_3004 | MmcI protein. | Conserved hypothetical protein TIGR00026; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.766 |
ABK71452.1 | cofD | MSMEG_2904 | MSMEG_1830 | MmcI protein. | Lppg:fo 2-phospho-l-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP. | 0.691 |
ABK71452.1 | fbiD | MSMEG_2904 | MSMEG_2392 | MmcI protein. | Conserved hypothetical protein; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family. | 0.559 |
ABK71916.1 | ABK69720.1 | MSMEG_5998 | MSMEG_2906 | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | Conserved hypothetical protein. | 0.767 |
ABK71916.1 | ABK71452.1 | MSMEG_5998 | MSMEG_2904 | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | MmcI protein. | 0.769 |
ABK71916.1 | ABK73168.1 | MSMEG_5998 | MSMEG_1794 | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | Dehydrogenase; Identified by match to protein family HMM PF00296. | 0.797 |
ABK71916.1 | ABK76236.1 | MSMEG_5998 | MSMEG_6885 | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | MmcI protein. | 0.775 |
ABK71916.1 | cofD | MSMEG_5998 | MSMEG_1830 | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | Lppg:fo 2-phospho-l-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP. | 0.930 |
ABK71916.1 | fbiD | MSMEG_5998 | MSMEG_2392 | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | Conserved hypothetical protein; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family. | 0.772 |
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