Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70659.1 | ABK72280.1 | MSMEG_3748 | MSMEG_1824 | Thiamin pyrophosphokinase, catalytic domain protein. | Transcriptional regulator, LytR family protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | 0.682 |
| ABK70804.1 | ABK72280.1 | MSMEG_1567 | MSMEG_1824 | Conserved hypothetical protein. | Transcriptional regulator, LytR family protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | 0.666 |
| ABK70804.1 | ABK72696.1 | MSMEG_1567 | MSMEG_1684 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.777 |
| ABK70804.1 | ABK73213.1 | MSMEG_1567 | MSMEG_1826 | Conserved hypothetical protein. | dTDP-RhA:a-D-GlcNAc-diphosphoryl polyprenol, a-3-L-rhamnosyl transferase; Identified by match to protein family HMM PF00535. | 0.420 |
| ABK70804.1 | ABK73297.1 | MSMEG_1567 | MSMEG_5468 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.769 |
| ABK70804.1 | ABK74693.1 | MSMEG_1567 | MSMEG_1929 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.776 |
| ABK70804.1 | ABK76005.1 | MSMEG_1567 | MSMEG_4238 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.754 |
| ABK71094.1 | ABK72280.1 | MSMEG_1823 | MSMEG_1824 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | Transcriptional regulator, LytR family protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | 0.871 |
| ABK71094.1 | ABK73213.1 | MSMEG_1823 | MSMEG_1826 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | dTDP-RhA:a-D-GlcNAc-diphosphoryl polyprenol, a-3-L-rhamnosyl transferase; Identified by match to protein family HMM PF00535. | 0.552 |
| ABK71094.1 | rfbD | MSMEG_1823 | MSMEG_1825 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | dTDP-4-dehydrorhamnose reductase; Involved in the biosynthesis of the dTDP-L-rhamnose which is a component of the critical linker, D-N-acetylglucosamine-L-rhamnose disaccharide, which connects the galactan region of arabinogalactan to peptidoglycan via a phosphodiester linkage. Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L- rhamnose (By similarity); Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.764 |
| ABK72280.1 | ABK70659.1 | MSMEG_1824 | MSMEG_3748 | Transcriptional regulator, LytR family protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | Thiamin pyrophosphokinase, catalytic domain protein. | 0.682 |
| ABK72280.1 | ABK70804.1 | MSMEG_1824 | MSMEG_1567 | Transcriptional regulator, LytR family protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | Conserved hypothetical protein. | 0.666 |
| ABK72280.1 | ABK71094.1 | MSMEG_1824 | MSMEG_1823 | Transcriptional regulator, LytR family protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | 0.871 |
| ABK72280.1 | ABK72696.1 | MSMEG_1824 | MSMEG_1684 | Transcriptional regulator, LytR family protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | Conserved hypothetical protein. | 0.736 |
| ABK72280.1 | ABK73213.1 | MSMEG_1824 | MSMEG_1826 | Transcriptional regulator, LytR family protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | dTDP-RhA:a-D-GlcNAc-diphosphoryl polyprenol, a-3-L-rhamnosyl transferase; Identified by match to protein family HMM PF00535. | 0.756 |
| ABK72280.1 | ABK73297.1 | MSMEG_1824 | MSMEG_5468 | Transcriptional regulator, LytR family protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | Conserved hypothetical protein. | 0.658 |
| ABK72280.1 | ABK74693.1 | MSMEG_1824 | MSMEG_1929 | Transcriptional regulator, LytR family protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | Conserved hypothetical protein. | 0.661 |
| ABK72280.1 | ABK76005.1 | MSMEG_1824 | MSMEG_4238 | Transcriptional regulator, LytR family protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | Conserved hypothetical protein. | 0.668 |
| ABK72280.1 | rfbD | MSMEG_1824 | MSMEG_1825 | Transcriptional regulator, LytR family protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | dTDP-4-dehydrorhamnose reductase; Involved in the biosynthesis of the dTDP-L-rhamnose which is a component of the critical linker, D-N-acetylglucosamine-L-rhamnose disaccharide, which connects the galactan region of arabinogalactan to peptidoglycan via a phosphodiester linkage. Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L- rhamnose (By similarity); Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.945 |
| ABK72280.1 | wecA | MSMEG_1824 | MSMEG_4947 | Transcriptional regulator, LytR family protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | Glycosyl trasferase; Involved in the biosynthesis of the disaccharide D-N- acetylglucosamine-L-rhamnose which plays an important role in the mycobacterial cell wall as a linker connecting arabinogalactan and peptidoglycan via a phosphodiester linkage. Catalyzes the transfer of the N-acetylglucosamine-1-phosphate (GlcNAc-1P) moiety from UDP-GlcNAc onto the carrier lipid decaprenyl phosphate (C50-P), yielding GlcNAc- pyrophosphoryl-decaprenyl (GlcNAc-PP-C50). | 0.677 |
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