Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70887.1 | ABK71925.1 | MSMEG_4701 | MSMEG_6292 | Single-strand binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | Transcription elongation factor GreA; Identified by match to protein family HMM PF01272. | 0.573 |
| ABK70887.1 | ABK72913.1 | MSMEG_4701 | MSMEG_5414 | Single-strand binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | Septum formation initiator subfamily protein, putative; Identified by match to protein family HMM PF04417; match to protein family HMM PF04977. | 0.630 |
| ABK70887.1 | ABK72985.1 | MSMEG_4701 | MSMEG_0970 | Single-strand binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | Identified by match to protein family HMM PF00300. | 0.562 |
| ABK70887.1 | ABK73959.1 | MSMEG_4701 | MSMEG_2443 | Single-strand binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | Conserved hypothetical protein. | 0.751 |
| ABK70887.1 | ABK74795.1 | MSMEG_4701 | MSMEG_3644 | Single-strand binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | Transcriptional regulator, MerR family protein. | 0.725 |
| ABK70887.1 | nucS | MSMEG_4701 | MSMEG_4923 | Single-strand binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | Conserved hypothetical protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.705 |
| ABK70887.1 | rpoZ | MSMEG_4701 | MSMEG_3053 | Single-strand binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.765 |
| ABK70887.1 | secG | MSMEG_4701 | MSMEG_3087 | Single-strand binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.759 |
| ABK70887.1 | whiB2 | MSMEG_4701 | MSMEG_1831 | Single-strand binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (By similarity); Belongs to the WhiB family. | 0.756 |
| ABK71925.1 | ABK70887.1 | MSMEG_6292 | MSMEG_4701 | Transcription elongation factor GreA; Identified by match to protein family HMM PF01272. | Single-strand binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | 0.573 |
| ABK71925.1 | ABK72913.1 | MSMEG_6292 | MSMEG_5414 | Transcription elongation factor GreA; Identified by match to protein family HMM PF01272. | Septum formation initiator subfamily protein, putative; Identified by match to protein family HMM PF04417; match to protein family HMM PF04977. | 0.623 |
| ABK71925.1 | ABK72985.1 | MSMEG_6292 | MSMEG_0970 | Transcription elongation factor GreA; Identified by match to protein family HMM PF01272. | Identified by match to protein family HMM PF00300. | 0.652 |
| ABK71925.1 | ABK73959.1 | MSMEG_6292 | MSMEG_2443 | Transcription elongation factor GreA; Identified by match to protein family HMM PF01272. | Conserved hypothetical protein. | 0.685 |
| ABK71925.1 | ABK74795.1 | MSMEG_6292 | MSMEG_3644 | Transcription elongation factor GreA; Identified by match to protein family HMM PF01272. | Transcriptional regulator, MerR family protein. | 0.754 |
| ABK71925.1 | nucS | MSMEG_6292 | MSMEG_4923 | Transcription elongation factor GreA; Identified by match to protein family HMM PF01272. | Conserved hypothetical protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.568 |
| ABK71925.1 | rpoZ | MSMEG_6292 | MSMEG_3053 | Transcription elongation factor GreA; Identified by match to protein family HMM PF01272. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.937 |
| ABK71925.1 | secG | MSMEG_6292 | MSMEG_3087 | Transcription elongation factor GreA; Identified by match to protein family HMM PF01272. | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.689 |
| ABK71925.1 | whiA | MSMEG_6292 | MSMEG_3081 | Transcription elongation factor GreA; Identified by match to protein family HMM PF01272. | Conserved hypothetical protein; Involved in cell division and chromosome segregation. | 0.564 |
| ABK71925.1 | whiB2 | MSMEG_6292 | MSMEG_1831 | Transcription elongation factor GreA; Identified by match to protein family HMM PF01272. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (By similarity); Belongs to the WhiB family. | 0.762 |
| ABK72913.1 | ABK70887.1 | MSMEG_5414 | MSMEG_4701 | Septum formation initiator subfamily protein, putative; Identified by match to protein family HMM PF04417; match to protein family HMM PF04977. | Single-strand binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | 0.630 |
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