STRINGSTRING
ABK71827.1 ABK71827.1 manA manA ManB ManB ABK71592.1 ABK71592.1 ABK73349.1 ABK73349.1 murC murC ABK71738.1 ABK71738.1 cobN cobN ABK74234.1 ABK74234.1 ABK74778.1 ABK74778.1 ABK75644.1 ABK75644.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71827.1TobH protein. (360 aa)    
Predicted Functional Partners:
manA
Mannose-6-phosphate isomerase, class I; Identified by match to protein family HMM PF01238; match to protein family HMM TIGR00218.
  
  
 0.919
ManB
Phosphomannomutase/phosphoglucomutase; Identified by similarity to SP:P29955; match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880.
  
  
 0.910
ABK71592.1
Conserved hypothetical protein.
  
  
 0.804
ABK73349.1
Conserved hypothetical protein.
  
    0.791
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
  
 0.790
ABK71738.1
Pyrimidine-specific ribonucleoside hydrolase RihA; Identified by match to protein family HMM PF01156.
  
  
 0.788
cobN
Cobaltochelatase, CobN subunit; Identified by match to protein family HMM PF02514; match to protein family HMM TIGR02257.
   
  
 0.780
ABK74234.1
Phosphoglucomutase/phosphomannomutase; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880.
  
  
 0.761
ABK74778.1
Probable conserved transmembrane protein.
  
    0.756
ABK75644.1
Conserved hypothetical protein.
  
    0.756
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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