Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK71592.1 | ABK71827.1 | MSMEG_6936 | MSMEG_1835 | Conserved hypothetical protein. | TobH protein. | 0.804 |
ABK71738.1 | ABK71827.1 | MSMEG_1621 | MSMEG_1835 | Pyrimidine-specific ribonucleoside hydrolase RihA; Identified by match to protein family HMM PF01156. | TobH protein. | 0.788 |
ABK71738.1 | cobN | MSMEG_1621 | MSMEG_3864 | Pyrimidine-specific ribonucleoside hydrolase RihA; Identified by match to protein family HMM PF01156. | Cobaltochelatase, CobN subunit; Identified by match to protein family HMM PF02514; match to protein family HMM TIGR02257. | 0.781 |
ABK71738.1 | murC | MSMEG_1621 | MSMEG_4226 | Pyrimidine-specific ribonucleoside hydrolase RihA; Identified by match to protein family HMM PF01156. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.779 |
ABK71827.1 | ABK71592.1 | MSMEG_1835 | MSMEG_6936 | TobH protein. | Conserved hypothetical protein. | 0.804 |
ABK71827.1 | ABK71738.1 | MSMEG_1835 | MSMEG_1621 | TobH protein. | Pyrimidine-specific ribonucleoside hydrolase RihA; Identified by match to protein family HMM PF01156. | 0.788 |
ABK71827.1 | ABK73349.1 | MSMEG_1835 | MSMEG_4692 | TobH protein. | Conserved hypothetical protein. | 0.791 |
ABK71827.1 | ABK74234.1 | MSMEG_1835 | MSMEG_1695 | TobH protein. | Phosphoglucomutase/phosphomannomutase; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880. | 0.761 |
ABK71827.1 | ABK74778.1 | MSMEG_1835 | MSMEG_1110 | TobH protein. | Probable conserved transmembrane protein. | 0.756 |
ABK71827.1 | ABK75644.1 | MSMEG_1835 | MSMEG_6434 | TobH protein. | Conserved hypothetical protein. | 0.756 |
ABK71827.1 | ManB | MSMEG_1835 | MSMEG_1834 | TobH protein. | Phosphomannomutase/phosphoglucomutase; Identified by similarity to SP:P29955; match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880. | 0.910 |
ABK71827.1 | cobN | MSMEG_1835 | MSMEG_3864 | TobH protein. | Cobaltochelatase, CobN subunit; Identified by match to protein family HMM PF02514; match to protein family HMM TIGR02257. | 0.780 |
ABK71827.1 | manA | MSMEG_1835 | MSMEG_1836 | TobH protein. | Mannose-6-phosphate isomerase, class I; Identified by match to protein family HMM PF01238; match to protein family HMM TIGR00218. | 0.919 |
ABK71827.1 | murC | MSMEG_1835 | MSMEG_4226 | TobH protein. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.790 |
ABK73349.1 | ABK71827.1 | MSMEG_4692 | MSMEG_1835 | Conserved hypothetical protein. | TobH protein. | 0.791 |
ABK73349.1 | ABK74778.1 | MSMEG_4692 | MSMEG_1110 | Conserved hypothetical protein. | Probable conserved transmembrane protein. | 0.675 |
ABK73349.1 | ABK75644.1 | MSMEG_4692 | MSMEG_6434 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.676 |
ABK74234.1 | ABK71827.1 | MSMEG_1695 | MSMEG_1835 | Phosphoglucomutase/phosphomannomutase; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880. | TobH protein. | 0.761 |
ABK74234.1 | ManB | MSMEG_1695 | MSMEG_1834 | Phosphoglucomutase/phosphomannomutase; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880. | Phosphomannomutase/phosphoglucomutase; Identified by similarity to SP:P29955; match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880. | 0.916 |
ABK74234.1 | manA | MSMEG_1695 | MSMEG_1836 | Phosphoglucomutase/phosphomannomutase; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880. | Mannose-6-phosphate isomerase, class I; Identified by match to protein family HMM PF01238; match to protein family HMM TIGR00218. | 0.953 |
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