STRINGSTRING
ABK71067.1 ABK71067.1 ABK72504.1 ABK72504.1 ABK72366.1 ABK72366.1 ABK75495.1 ABK75495.1 ABK71798.1 ABK71798.1 eccB3 eccB3 ABK71593.1 ABK71593.1 ABK75153.1 ABK75153.1 ABK70936.1 ABK70936.1 ABK76136.1 ABK76136.1 ABK71135.1 ABK71135.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71067.1Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. (241 aa)    
Predicted Functional Partners:
ABK72504.1
Alkane 1-monooxygenase; Identified by match to protein family HMM PF00487.
 
    0.945
ABK72366.1
Rubredoxin; Identified by match to protein family HMM PF00301; Belongs to the rubredoxin family.
 
    0.880
ABK75495.1
Rubredoxin; Identified by match to protein family HMM PF00301.
  
    0.840
ABK71798.1
Conserved hypothetical protein.
 
  
 0.712
eccB3
Conserved hypothetical protein; An ATPase (By similarity). Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG.
  
    0.667
ABK71593.1
LprB protein.
  
     0.641
ABK75153.1
Conserved hypothetical protein.
  
   
 0.624
ABK70936.1
Conserved hypothetical protein.
  
   
 0.624
ABK76136.1
Adenylate cyclase, family protein 3; Identified by match to protein family HMM PF00211; match to protein family HMM PF00672.
 
     0.624
ABK71135.1
Cysteine dioxygenase type I superfamily protein; Identified by match to protein family HMM PF05995.
  
     0.623
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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