Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69844.1 | ABK73125.1 | MSMEG_1870 | MSMEG_1868 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.496 |
ABK69844.1 | ABK74082.1 | MSMEG_1870 | MSMEG_1869 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.575 |
ABK69844.1 | ABK75161.1 | MSMEG_1870 | MSMEG_1872 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF06013; Belongs to the WXG100 family. | 0.754 |
ABK69844.1 | ABK75825.1 | MSMEG_1870 | MSMEG_1871 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the WXG100 family. | 0.798 |
ABK70227.1 | ABK70839.1 | MSMEG_1866 | MSMEG_1867 | Identified by match to protein family HMM PF00665. | Transposase; Identified by match to protein family HMM PF01527. | 0.934 |
ABK70227.1 | ABK73125.1 | MSMEG_1866 | MSMEG_1868 | Identified by match to protein family HMM PF00665. | Hypothetical protein; Identified by Glimmer2; putative. | 0.405 |
ABK70839.1 | ABK70227.1 | MSMEG_1867 | MSMEG_1866 | Transposase; Identified by match to protein family HMM PF01527. | Identified by match to protein family HMM PF00665. | 0.934 |
ABK70839.1 | ABK73125.1 | MSMEG_1867 | MSMEG_1868 | Transposase; Identified by match to protein family HMM PF01527. | Hypothetical protein; Identified by Glimmer2; putative. | 0.439 |
ABK73125.1 | ABK69844.1 | MSMEG_1868 | MSMEG_1870 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.496 |
ABK73125.1 | ABK70227.1 | MSMEG_1868 | MSMEG_1866 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM PF00665. | 0.405 |
ABK73125.1 | ABK70839.1 | MSMEG_1868 | MSMEG_1867 | Hypothetical protein; Identified by Glimmer2; putative. | Transposase; Identified by match to protein family HMM PF01527. | 0.439 |
ABK73125.1 | ABK74082.1 | MSMEG_1868 | MSMEG_1869 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.663 |
ABK73125.1 | ABK75161.1 | MSMEG_1868 | MSMEG_1872 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by match to protein family HMM PF06013; Belongs to the WXG100 family. | 0.471 |
ABK73125.1 | ABK75825.1 | MSMEG_1868 | MSMEG_1871 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Belongs to the WXG100 family. | 0.500 |
ABK74082.1 | ABK69844.1 | MSMEG_1869 | MSMEG_1870 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.575 |
ABK74082.1 | ABK73125.1 | MSMEG_1869 | MSMEG_1868 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.663 |
ABK74082.1 | ABK75161.1 | MSMEG_1869 | MSMEG_1872 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by match to protein family HMM PF06013; Belongs to the WXG100 family. | 0.541 |
ABK74082.1 | ABK75825.1 | MSMEG_1869 | MSMEG_1871 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Belongs to the WXG100 family. | 0.572 |
ABK75161.1 | ABK69844.1 | MSMEG_1872 | MSMEG_1870 | Conserved hypothetical protein; Identified by match to protein family HMM PF06013; Belongs to the WXG100 family. | Conserved hypothetical protein. | 0.754 |
ABK75161.1 | ABK73125.1 | MSMEG_1872 | MSMEG_1868 | Conserved hypothetical protein; Identified by match to protein family HMM PF06013; Belongs to the WXG100 family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.471 |
page 1 of 2