STRINGSTRING
ABK75917.1 ABK75917.1 ABK74700.1 ABK74700.1 ABK70703.1 ABK70703.1 ABK75426.1 ABK75426.1 ABK71132.1 ABK71132.1 ABK71291.1 ABK71291.1 ABK74100.1 ABK74100.1 ABK69571.1 ABK69571.1 ABK73286.1 ABK73286.1 ABK70870.1 ABK70870.1 ABK71942.1 ABK71942.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75917.1Conserved domain protein; Identified by match to protein family HMM PF00364. (73 aa)    
Predicted Functional Partners:
ABK74700.1
biotin-[acetyl-CoA-carboxylase] ligase; Identified by match to protein family HMM PF02237; match to protein family HMM PF03099; match to protein family HMM TIGR00121.
 
 
 0.883
ABK70703.1
Sensor histidine kinase; Identified by match to protein family HMM PF02518; match to protein family HMM PF07568.
  
    0.792
ABK75426.1
propionyl-CoA carboxylase beta chain; Identified by match to protein family HMM PF01039.
 
 0.744
ABK71132.1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain; Identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02785; match to protein family HMM PF02786.
 
 0.699
ABK71291.1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain; Identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02222; match to protein family HMM PF02785; match to protein family HMM PF02786.
 
 0.682
ABK74100.1
propionyl-CoA carboxylase beta chain; Identified by match to protein family HMM PF01039.
  
 0.663
ABK69571.1
Carboxyl transferase domain protein; Identified by match to protein family HMM PF01039.
  
 0.662
ABK73286.1
propionyl-CoA carboxylase beta chain; Identified by match to protein family HMM PF01039.
  
 0.662
ABK70870.1
Carboxyl transferase domain protein; Identified by match to protein family HMM PF01039.
  
 0.657
ABK71942.1
Carboxyl transferase domain protein; Identified by match to protein family HMM PF01039.
  
 0.657
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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