Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71060.1 | ABK71860.1 | MSMEG_5877 | MSMEG_6281 | Conserved hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. | 0.720 |
| ABK71060.1 | ABK73072.1 | MSMEG_5877 | MSMEG_1932 | Conserved hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | MmpS3 protein. | 0.598 |
| ABK71860.1 | ABK71060.1 | MSMEG_6281 | MSMEG_5877 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. | Conserved hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.720 |
| ABK71860.1 | ABK73072.1 | MSMEG_6281 | MSMEG_1932 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. | MmpS3 protein. | 0.686 |
| ABK71860.1 | ABK75647.1 | MSMEG_6281 | MSMEG_4156 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. | Putative transposase; Identified by match to protein family HMM PF00589. | 0.513 |
| ABK71860.1 | ftsW | MSMEG_6281 | MSMEG_4228 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. | Cell division protein FtsW; Identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; Belongs to the SEDS family. | 0.657 |
| ABK71860.1 | xerC | MSMEG_6281 | MSMEG_2515 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.612 |
| ABK73072.1 | ABK71060.1 | MSMEG_1932 | MSMEG_5877 | MmpS3 protein. | Conserved hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.598 |
| ABK73072.1 | ABK71860.1 | MSMEG_1932 | MSMEG_6281 | MmpS3 protein. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. | 0.686 |
| ABK73072.1 | ABK75564.1 | MSMEG_1932 | MSMEG_1934 | MmpS3 protein. | ATP-binding protein. | 0.595 |
| ABK73072.1 | ABK75647.1 | MSMEG_1932 | MSMEG_4156 | MmpS3 protein. | Putative transposase; Identified by match to protein family HMM PF00589. | 0.483 |
| ABK73072.1 | ftsW | MSMEG_1932 | MSMEG_4228 | MmpS3 protein. | Cell division protein FtsW; Identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; Belongs to the SEDS family. | 0.679 |
| ABK73072.1 | xerC | MSMEG_1932 | MSMEG_2515 | MmpS3 protein. | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.596 |
| ABK75564.1 | ABK73072.1 | MSMEG_1934 | MSMEG_1932 | ATP-binding protein. | MmpS3 protein. | 0.595 |
| ABK75647.1 | ABK71860.1 | MSMEG_4156 | MSMEG_6281 | Putative transposase; Identified by match to protein family HMM PF00589. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. | 0.513 |
| ABK75647.1 | ABK73072.1 | MSMEG_4156 | MSMEG_1932 | Putative transposase; Identified by match to protein family HMM PF00589. | MmpS3 protein. | 0.483 |
| ABK75647.1 | ftsW | MSMEG_4156 | MSMEG_4228 | Putative transposase; Identified by match to protein family HMM PF00589. | Cell division protein FtsW; Identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; Belongs to the SEDS family. | 0.537 |
| ftsW | ABK71860.1 | MSMEG_4228 | MSMEG_6281 | Cell division protein FtsW; Identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; Belongs to the SEDS family. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. | 0.657 |
| ftsW | ABK73072.1 | MSMEG_4228 | MSMEG_1932 | Cell division protein FtsW; Identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; Belongs to the SEDS family. | MmpS3 protein. | 0.679 |
| ftsW | ABK75647.1 | MSMEG_4228 | MSMEG_4156 | Cell division protein FtsW; Identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; Belongs to the SEDS family. | Putative transposase; Identified by match to protein family HMM PF00589. | 0.537 |
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