Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69679.1 | ABK73076.1 | MSMEG_4267 | MSMEG_0004 | Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | RecF-gyrB intergenic region protein; identified by match to protein family HMM PF05258; Belongs to the UPF0232 family. | 0.409 |
| ABK69679.1 | ABK73621.1 | MSMEG_4267 | MSMEG_4263 | Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | 0.999 |
| ABK69679.1 | ABK75074.1 | MSMEG_4267 | MSMEG_4261 | Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | Ubiquinol-cytochrome c reductase cytochrome c subunit; Identified by match to protein family HMM PF00034. | 0.999 |
| ABK69679.1 | ABK75080.1 | MSMEG_4267 | MSMEG_4237 | Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | Probable conserved transmembrane protein. | 0.705 |
| ABK69679.1 | ABK75231.1 | MSMEG_4267 | MSMEG_2764 | Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | Probable conserved alanine rich transmembrane protein. | 0.519 |
| ABK69679.1 | ABK75564.1 | MSMEG_4267 | MSMEG_1934 | Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | ATP-binding protein. | 0.604 |
| ABK69679.1 | ABK75942.1 | MSMEG_4267 | MSMEG_4262 | Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Identified by match to protein family HMM PF00355. | 0.999 |
| ABK73072.1 | ABK75564.1 | MSMEG_1932 | MSMEG_1934 | MmpS3 protein. | ATP-binding protein. | 0.595 |
| ABK73076.1 | ABK69679.1 | MSMEG_0004 | MSMEG_4267 | RecF-gyrB intergenic region protein; identified by match to protein family HMM PF05258; Belongs to the UPF0232 family. | Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | 0.409 |
| ABK73076.1 | ABK75564.1 | MSMEG_0004 | MSMEG_1934 | RecF-gyrB intergenic region protein; identified by match to protein family HMM PF05258; Belongs to the UPF0232 family. | ATP-binding protein. | 0.515 |
| ABK73076.1 | whiB | MSMEG_0004 | MSMEG_1919 | RecF-gyrB intergenic region protein; identified by match to protein family HMM PF05258; Belongs to the UPF0232 family. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.590 |
| ABK73076.1 | whiB2 | MSMEG_0004 | MSMEG_1831 | RecF-gyrB intergenic region protein; identified by match to protein family HMM PF05258; Belongs to the UPF0232 family. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (By similarity); Belongs to the WhiB family. | 0.653 |
| ABK73621.1 | ABK69679.1 | MSMEG_4263 | MSMEG_4267 | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | 0.999 |
| ABK73621.1 | ABK75074.1 | MSMEG_4263 | MSMEG_4261 | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | Ubiquinol-cytochrome c reductase cytochrome c subunit; Identified by match to protein family HMM PF00034. | 0.999 |
| ABK73621.1 | ABK75080.1 | MSMEG_4263 | MSMEG_4237 | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | Probable conserved transmembrane protein. | 0.539 |
| ABK73621.1 | ABK75564.1 | MSMEG_4263 | MSMEG_1934 | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | ATP-binding protein. | 0.573 |
| ABK73621.1 | ABK75942.1 | MSMEG_4263 | MSMEG_4262 | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Identified by match to protein family HMM PF00355. | 0.999 |
| ABK75074.1 | ABK69679.1 | MSMEG_4261 | MSMEG_4267 | Ubiquinol-cytochrome c reductase cytochrome c subunit; Identified by match to protein family HMM PF00034. | Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | 0.999 |
| ABK75074.1 | ABK73621.1 | MSMEG_4261 | MSMEG_4263 | Ubiquinol-cytochrome c reductase cytochrome c subunit; Identified by match to protein family HMM PF00034. | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | 0.999 |
| ABK75074.1 | ABK75080.1 | MSMEG_4261 | MSMEG_4237 | Ubiquinol-cytochrome c reductase cytochrome c subunit; Identified by match to protein family HMM PF00034. | Probable conserved transmembrane protein. | 0.716 |
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