Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK71034.1 | ABK71460.1 | MSMEG_1948 | MSMEG_1949 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.580 |
ABK71034.1 | ABK72486.1 | MSMEG_1948 | MSMEG_1951 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved domain protein. | 0.429 |
ABK71034.1 | ABK75096.1 | MSMEG_1948 | MSMEG_1950 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by match to protein family HMM PF05532. | 0.429 |
ABK71034.1 | ABK75427.1 | MSMEG_1948 | MSMEG_1947 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by match to protein family HMM PF00462; match to protein family HMM TIGR02200. | 0.490 |
ABK71460.1 | ABK71034.1 | MSMEG_1949 | MSMEG_1948 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.580 |
ABK71460.1 | ABK72486.1 | MSMEG_1949 | MSMEG_1951 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved domain protein. | 0.561 |
ABK71460.1 | ABK75096.1 | MSMEG_1949 | MSMEG_1950 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by match to protein family HMM PF05532. | 0.561 |
ABK72486.1 | ABK71034.1 | MSMEG_1951 | MSMEG_1948 | Conserved domain protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.429 |
ABK72486.1 | ABK71460.1 | MSMEG_1951 | MSMEG_1949 | Conserved domain protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.561 |
ABK72486.1 | ABK75096.1 | MSMEG_1951 | MSMEG_1950 | Conserved domain protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF05532. | 0.840 |
ABK75096.1 | ABK71034.1 | MSMEG_1950 | MSMEG_1948 | Conserved hypothetical protein; Identified by match to protein family HMM PF05532. | Hypothetical protein; Identified by Glimmer2; putative. | 0.429 |
ABK75096.1 | ABK71460.1 | MSMEG_1950 | MSMEG_1949 | Conserved hypothetical protein; Identified by match to protein family HMM PF05532. | Hypothetical protein; Identified by Glimmer2; putative. | 0.561 |
ABK75096.1 | ABK72486.1 | MSMEG_1950 | MSMEG_1951 | Conserved hypothetical protein; Identified by match to protein family HMM PF05532. | Conserved domain protein. | 0.840 |
ABK75427.1 | ABK71034.1 | MSMEG_1947 | MSMEG_1948 | Conserved hypothetical protein; Identified by match to protein family HMM PF00462; match to protein family HMM TIGR02200. | Hypothetical protein; Identified by Glimmer2; putative. | 0.490 |