STRINGSTRING
ABK74798.1 ABK74798.1 arsC arsC ABK70997.1 ABK70997.1 ABK70869.1 ABK70869.1 ABK74249.1 ABK74249.1 arsB arsB ectC ectC ABK70701.1 ABK70701.1 ABK70438.1 ABK70438.1 ABK70363.1 ABK70363.1 ABK74188.1 ABK74188.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74798.1Conserved hypothetical protein. (279 aa)    
Predicted Functional Partners:
arsC
Arsenate reductase; Identified by match to protein family HMM PF03960; match to protein family HMM TIGR00014; Belongs to the ArsC family.
   
  
 0.688
ABK70997.1
Identified by match to protein family HMM PF03109.
 
     0.677
ABK70869.1
Conserved hypothetical protein.
  
    0.675
ABK74249.1
Conserved hypothetical protein.
  
    0.670
arsB
Identified by match to protein family HMM PF01758; match to protein family HMM TIGR00832.
   
  
 0.667
ectC
Ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant.
   
  
 0.588
ABK70701.1
Identified by match to protein family HMM PF00293.
  
    0.572
ABK70438.1
Conserved hypothetical protein.
  
    0.531
ABK70363.1
Conserved hypothetical protein.
  
    0.520
ABK74188.1
PDZ domain family protein.
       0.513
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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