STRINGSTRING
ABK73615.1 ABK73615.1 ABK72653.1 ABK72653.1 ABK72773.1 ABK72773.1 ABK72697.1 ABK72697.1 ABK69531.1 ABK69531.1 ABK74494.1 ABK74494.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73615.1Hypothetical protein; Identified by Glimmer2; putative. (136 aa)    
Predicted Functional Partners:
ABK72653.1
TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440.
       0.549
ABK72773.1
Conserved hypothetical protein.
 
    0.547
ABK72697.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01796.
 
    0.533
ABK69531.1
Conserved hypothetical protein.
  
    0.438
ABK74494.1
Conserved membrane protein.
  
    0.430
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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