STRINGSTRING
ABK74157.1 ABK74157.1 ABK71490.1 ABK71490.1 ABK76210.1 ABK76210.1 ABK73670.1 ABK73670.1 ABK73623.1 ABK73623.1 ABK70590.1 ABK70590.1 ABK75342.1 ABK75342.1 ABK69601.1 ABK69601.1 ABK75830.1 ABK75830.1 ABK73818.1 ABK73818.1 ABK71938.1 ABK71938.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74157.1MaoC like domain protein; Identified by match to protein family HMM PF01575. (277 aa)    
Predicted Functional Partners:
ABK71490.1
HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.872
ABK76210.1
L-carnitine dehydratase/bile acid-inducible protein F; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family.
 
  
 0.784
ABK73670.1
isovaleryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
 
    0.735
ABK73623.1
Biotin sulfoxide reductase; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR00509; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
    0.541
ABK70590.1
malyl-CoA lyase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.540
ABK75342.1
Identified by match to protein family HMM PF03972.
 
  
 0.536
ABK69601.1
Conserved hypothetical protein; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.534
ABK75830.1
malyl-CoA lyase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.533
ABK73818.1
Rhodanese domain protein/cystathionine beta-lyase.
 
    0.527
ABK71938.1
HpcH/HpaI aldolase/citrate lyase family protein; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.522
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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