Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70373.1 | ABK73393.1 | MSMEG_6811 | MSMEG_6442 | Conserved hypothetical protein. | Integral membrane protein. | 0.402 |
ABK70373.1 | ABK73696.1 | MSMEG_6811 | MSMEG_1997 | Conserved hypothetical protein. | N-acyl-D-glutamate amidohydrolase. | 0.539 |
ABK70504.1 | ABK73323.1 | MSMEG_1996 | MSMEG_1998 | N5,N10- methylenetetrahydromethanopterin reductase-related protein; Identified by match to protein family HMM PF00296. | Hydrolase, alpha/beta fold family protein; Identified by match to protein family HMM PF00561. | 0.516 |
ABK70504.1 | ABK73696.1 | MSMEG_1996 | MSMEG_1997 | N5,N10- methylenetetrahydromethanopterin reductase-related protein; Identified by match to protein family HMM PF00296. | N-acyl-D-glutamate amidohydrolase. | 0.493 |
ABK72203.1 | ABK73177.1 | MSMEG_6071 | MSMEG_0625 | Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00753. | Conserved hypothetical protein. | 0.521 |
ABK72203.1 | ABK73696.1 | MSMEG_6071 | MSMEG_1997 | Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00753. | N-acyl-D-glutamate amidohydrolase. | 0.454 |
ABK72305.1 | ABK73177.1 | MSMEG_6575 | MSMEG_0625 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Conserved hypothetical protein. | 0.625 |
ABK72305.1 | ABK73696.1 | MSMEG_6575 | MSMEG_1997 | Beta-lactamase; Identified by match to protein family HMM PF00144. | N-acyl-D-glutamate amidohydrolase. | 0.455 |
ABK72305.1 | ABK74758.1 | MSMEG_6575 | MSMEG_3683 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Conserved hypothetical protein. | 0.658 |
ABK72819.1 | ABK73696.1 | MSMEG_6139 | MSMEG_1997 | Putative HTH-type transcriptional regulator; Identified by match to protein family HMM PF00440. | N-acyl-D-glutamate amidohydrolase. | 0.441 |
ABK73177.1 | ABK72203.1 | MSMEG_0625 | MSMEG_6071 | Conserved hypothetical protein. | Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00753. | 0.521 |
ABK73177.1 | ABK72305.1 | MSMEG_0625 | MSMEG_6575 | Conserved hypothetical protein. | Beta-lactamase; Identified by match to protein family HMM PF00144. | 0.625 |
ABK73177.1 | ABK73696.1 | MSMEG_0625 | MSMEG_1997 | Conserved hypothetical protein. | N-acyl-D-glutamate amidohydrolase. | 0.583 |
ABK73177.1 | ABK74758.1 | MSMEG_0625 | MSMEG_3683 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.419 |
ABK73220.1 | ABK73696.1 | MSMEG_3786 | MSMEG_1997 | D-amino acid deaminase. | N-acyl-D-glutamate amidohydrolase. | 0.469 |
ABK73323.1 | ABK70504.1 | MSMEG_1998 | MSMEG_1996 | Hydrolase, alpha/beta fold family protein; Identified by match to protein family HMM PF00561. | N5,N10- methylenetetrahydromethanopterin reductase-related protein; Identified by match to protein family HMM PF00296. | 0.516 |
ABK73323.1 | ABK73696.1 | MSMEG_1998 | MSMEG_1997 | Hydrolase, alpha/beta fold family protein; Identified by match to protein family HMM PF00561. | N-acyl-D-glutamate amidohydrolase. | 0.785 |
ABK73393.1 | ABK70373.1 | MSMEG_6442 | MSMEG_6811 | Integral membrane protein. | Conserved hypothetical protein. | 0.402 |
ABK73393.1 | ABK73696.1 | MSMEG_6442 | MSMEG_1997 | Integral membrane protein. | N-acyl-D-glutamate amidohydrolase. | 0.478 |
ABK73696.1 | ABK70373.1 | MSMEG_1997 | MSMEG_6811 | N-acyl-D-glutamate amidohydrolase. | Conserved hypothetical protein. | 0.539 |
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