STRINGSTRING
ABK70763.1 ABK70763.1 ABK70155.1 ABK70155.1 ABK71261.1 ABK71261.1 ABK70493.1 ABK70493.1 hisE hisE hisG hisG ABK72615.1 ABK72615.1 ABK74171.1 ABK74171.1 ABK74175.1 ABK74175.1 ABK70401.1 ABK70401.1 saeC saeC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70763.1Sugar transporter; Identified by match to protein family HMM PF00083. (220 aa)    
Predicted Functional Partners:
ABK70155.1
Arabinose-proton symporter.
  
 0.978
ABK71261.1
Major facilitator family protein transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
 
    0.717
ABK70493.1
Hypothetical metabolite transport protein YaaU; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
 
    0.707
hisE
phosphoribosyl-ATP pyrophosphohydrolase; Identified by match to protein family HMM PF01503.
  
    0.559
hisG
ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.
       0.554
ABK72615.1
Conserved hypothetical protein.
  
    0.546
ABK74171.1
IS1096, tnpR protein; Identified by similarity to GP:150004; match to protein family HMM PF07929.
       0.521
ABK74175.1
Cation-transporting ATPase Pma1; Identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494.
  
 0.468
ABK70401.1
Sugar transporter, permease protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
 
  
 0.463
saeC
Conserved hypothetical protein; May be involved in assembly of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Involved in DNA conjugation in recipient (MKD8) strain.
    
 0.460
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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