Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71883.1 | ABK72848.1 | MSMEG_2006 | MSMEG_2007 | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | Putative HpcE protein; Identified by match to protein family HMM PF01557. | 0.842 |
| ABK71883.1 | ABK72945.1 | MSMEG_2006 | MSMEG_2008 | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | Hypothetical protein; Identified by Glimmer2; putative. | 0.577 |
| ABK71883.1 | ABK73132.1 | MSMEG_2006 | MSMEG_4043 | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 0.526 |
| ABK71883.1 | ABK73908.1 | MSMEG_2006 | MSMEG_2009 | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | Regulatory protein GntR, HTH:GntR; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.648 |
| ABK71883.1 | ABK73921.1 | MSMEG_2006 | MSMEG_5364 | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 0.580 |
| ABK71883.1 | ABK74571.1 | MSMEG_2006 | MSMEG_4063 | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | Identified by match to protein family HMM PF04909. | 0.571 |
| ABK71883.1 | ABK75057.1 | MSMEG_2006 | MSMEG_1308 | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | Peptidase S15; Identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976. | 0.553 |
| ABK71883.1 | ABK75307.1 | MSMEG_2006 | MSMEG_2005 | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | Sugar phosphate isomerase/epimerase; Identified by match to protein family HMM PF01261. | 0.571 |
| ABK71883.1 | ABK75492.1 | MSMEG_2006 | MSMEG_2485 | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | Monooxygenase, FAD-binding; Identified by match to protein family HMM PF01494. | 0.487 |
| ABK71883.1 | ABK76131.1 | MSMEG_2006 | MSMEG_6813 | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 0.532 |
| ABK72848.1 | ABK71883.1 | MSMEG_2007 | MSMEG_2006 | Putative HpcE protein; Identified by match to protein family HMM PF01557. | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | 0.842 |
| ABK72848.1 | ABK72945.1 | MSMEG_2007 | MSMEG_2008 | Putative HpcE protein; Identified by match to protein family HMM PF01557. | Hypothetical protein; Identified by Glimmer2; putative. | 0.578 |
| ABK72848.1 | ABK73908.1 | MSMEG_2007 | MSMEG_2009 | Putative HpcE protein; Identified by match to protein family HMM PF01557. | Regulatory protein GntR, HTH:GntR; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.622 |
| ABK72848.1 | ABK75307.1 | MSMEG_2007 | MSMEG_2005 | Putative HpcE protein; Identified by match to protein family HMM PF01557. | Sugar phosphate isomerase/epimerase; Identified by match to protein family HMM PF01261. | 0.500 |
| ABK72945.1 | ABK71883.1 | MSMEG_2008 | MSMEG_2006 | Hypothetical protein; Identified by Glimmer2; putative. | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | 0.577 |
| ABK72945.1 | ABK72848.1 | MSMEG_2008 | MSMEG_2007 | Hypothetical protein; Identified by Glimmer2; putative. | Putative HpcE protein; Identified by match to protein family HMM PF01557. | 0.578 |
| ABK72945.1 | ABK73908.1 | MSMEG_2008 | MSMEG_2009 | Hypothetical protein; Identified by Glimmer2; putative. | Regulatory protein GntR, HTH:GntR; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.778 |
| ABK73132.1 | ABK71883.1 | MSMEG_4043 | MSMEG_2006 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | 0.526 |
| ABK73132.1 | ABK75057.1 | MSMEG_4043 | MSMEG_1308 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Peptidase S15; Identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976. | 0.502 |
| ABK73908.1 | ABK71883.1 | MSMEG_2009 | MSMEG_2006 | Regulatory protein GntR, HTH:GntR; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | 0.648 |
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