STRINGSTRING
ABK74840.1 ABK74840.1 ABK72467.1 ABK72467.1 ABK74411.1 ABK74411.1 ABK70099.1 ABK70099.1 ABK70243.1 ABK70243.1 hisD hisD ABK72846.1 ABK72846.1 ABK70594.1 ABK70594.1 ABK69765.1 ABK69765.1 ABK70442.1 ABK70442.1 ABK75464.1 ABK75464.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74840.1Transcriptional regulator, LacI family protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. (334 aa)    
Predicted Functional Partners:
ABK72467.1
Periplasmic binding proteins and sugar binding domain of the LacI family protein, putative; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.
  
    0.772
ABK74411.1
Multiphosphoryl transfer protein (MTP); Identified by match to protein family HMM PF00381; match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF03610; match to protein family HMM PF05524; match to protein family HMM TIGR01003; match to protein family HMM TIGR01417; match to protein family HMM TIGR02364; Belongs to the PEP-utilizing enzyme family.
  
 
 0.748
ABK70099.1
Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
  
 
 0.680
ABK70243.1
Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
  
 
 0.679
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
  
  
 0.598
ABK72846.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.559
ABK70594.1
Stress responsive A/B Barrel Domain superfamily protein; Identified by match to protein family HMM PF07876.
  
    0.486
ABK69765.1
Phosphocarrier protein hpr; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003.
  
 
 0.424
ABK70442.1
PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427.
  
  
 0.421
ABK75464.1
Carbohydrate kinase, fggy; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782; Belongs to the FGGY kinase family.
 
 
 0.419
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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