STRINGSTRING
ABK72941.1 ABK72941.1 ABK73672.1 ABK73672.1 modA modA ABK73833.1 ABK73833.1 modB modB ABK70992.1 ABK70992.1 ABK71737.1 ABK71737.1 ABK74536.1 ABK74536.1 ABK75128.1 ABK75128.1 ABK72420.1 ABK72420.1 ABK71358.1 ABK71358.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72941.1Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (248 aa)    
Predicted Functional Partners:
ABK73672.1
Transcriptional regulator, MerR family protein; Identified by match to protein family HMM PF00376; match to protein family HMM PF03459; match to protein family HMM TIGR01764.
   
   0.605
modA
Molybdate ABC transporter, periplasmic molybdate-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01256.
  
    0.547
ABK73833.1
Molybdenum import ATP-binding protein ModC; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; Belongs to the ABC transporter superfamily.
       0.541
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
       0.541
ABK70992.1
Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
 
    0.540
ABK71737.1
Conserved hypothetical protein.
 
    0.498
ABK74536.1
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
 
    0.454
ABK75128.1
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
 
    0.411
ABK72420.1
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106.
 
    0.404
ABK71358.1
Metal dependent hydrolase; Identified by match to protein family HMM PF00753.
 
  
 0.400
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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