Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69876.1 | ABK70563.1 | MSMEG_2023 | MSMEG_2021 | Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | Lipopolysaccharide biosynthesis acyltransferase, M; Identified by match to protein family HMM PF01757. | 0.431 |
| ABK69876.1 | ABK71234.1 | MSMEG_2023 | MSMEG_2025 | Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | Putative IclR family protein transcriptional regulator; Identified by match to protein family HMM PF01614. | 0.740 |
| ABK69876.1 | ABK73499.1 | MSMEG_2023 | MSMEG_2026 | Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.680 |
| ABK69876.1 | ABK73851.1 | MSMEG_2023 | MSMEG_2022 | Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | GntT protein, putative; Identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM PF06808. | 0.749 |
| ABK69876.1 | ABK75555.1 | MSMEG_2023 | MSMEG_2024 | Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | hydroxymethylglutaryl-CoA lyase; Identified by match to protein family HMM PF00682; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.917 |
| ABK69953.1 | ABK70563.1 | MSMEG_2404 | MSMEG_2021 | Extracellular deoxyribonuclease. | Lipopolysaccharide biosynthesis acyltransferase, M; Identified by match to protein family HMM PF01757. | 0.426 |
| ABK69953.1 | ABK74336.1 | MSMEG_2404 | MSMEG_5041 | Extracellular deoxyribonuclease. | Probable acyltransferase; Identified by match to protein family HMM PF01757. | 0.428 |
| ABK69953.1 | ABK75288.1 | MSMEG_2404 | MSMEG_0319 | Extracellular deoxyribonuclease. | Acyltransferase; Identified by match to protein family HMM PF01757. | 0.424 |
| ABK70563.1 | ABK69876.1 | MSMEG_2021 | MSMEG_2023 | Lipopolysaccharide biosynthesis acyltransferase, M; Identified by match to protein family HMM PF01757. | Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | 0.431 |
| ABK70563.1 | ABK69953.1 | MSMEG_2021 | MSMEG_2404 | Lipopolysaccharide biosynthesis acyltransferase, M; Identified by match to protein family HMM PF01757. | Extracellular deoxyribonuclease. | 0.426 |
| ABK70563.1 | ABK71079.1 | MSMEG_2021 | MSMEG_6140 | Lipopolysaccharide biosynthesis acyltransferase, M; Identified by match to protein family HMM PF01757. | Membrane protein. | 0.425 |
| ABK70563.1 | ABK71234.1 | MSMEG_2021 | MSMEG_2025 | Lipopolysaccharide biosynthesis acyltransferase, M; Identified by match to protein family HMM PF01757. | Putative IclR family protein transcriptional regulator; Identified by match to protein family HMM PF01614. | 0.420 |
| ABK70563.1 | ABK73328.1 | MSMEG_2021 | MSMEG_5044 | Lipopolysaccharide biosynthesis acyltransferase, M; Identified by match to protein family HMM PF01757. | ATPase. | 0.549 |
| ABK70563.1 | ABK73499.1 | MSMEG_2021 | MSMEG_2026 | Lipopolysaccharide biosynthesis acyltransferase, M; Identified by match to protein family HMM PF01757. | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.400 |
| ABK70563.1 | ABK73851.1 | MSMEG_2021 | MSMEG_2022 | Lipopolysaccharide biosynthesis acyltransferase, M; Identified by match to protein family HMM PF01757. | GntT protein, putative; Identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM PF06808. | 0.449 |
| ABK70563.1 | ABK74336.1 | MSMEG_2021 | MSMEG_5041 | Lipopolysaccharide biosynthesis acyltransferase, M; Identified by match to protein family HMM PF01757. | Probable acyltransferase; Identified by match to protein family HMM PF01757. | 0.439 |
| ABK70563.1 | ABK75288.1 | MSMEG_2021 | MSMEG_0319 | Lipopolysaccharide biosynthesis acyltransferase, M; Identified by match to protein family HMM PF01757. | Acyltransferase; Identified by match to protein family HMM PF01757. | 0.406 |
| ABK70563.1 | ABK75555.1 | MSMEG_2021 | MSMEG_2024 | Lipopolysaccharide biosynthesis acyltransferase, M; Identified by match to protein family HMM PF01757. | hydroxymethylglutaryl-CoA lyase; Identified by match to protein family HMM PF00682; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.425 |
| ABK71079.1 | ABK70563.1 | MSMEG_6140 | MSMEG_2021 | Membrane protein. | Lipopolysaccharide biosynthesis acyltransferase, M; Identified by match to protein family HMM PF01757. | 0.425 |
| ABK71234.1 | ABK69876.1 | MSMEG_2025 | MSMEG_2023 | Putative IclR family protein transcriptional regulator; Identified by match to protein family HMM PF01614. | Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | 0.740 |
page 1 of 3