STRINGSTRING
ABK73851.1 ABK73851.1 ABK75555.1 ABK75555.1 ABK69876.1 ABK69876.1 ABK71234.1 ABK71234.1 ABK73499.1 ABK73499.1 aroK aroK ABK74137.1 ABK74137.1 ABK71405.1 ABK71405.1 ABK75464.1 ABK75464.1 ABK74028.1 ABK74028.1 ABK75701.1 ABK75701.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73851.1GntT protein, putative; Identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM PF06808. (484 aa)    
Predicted Functional Partners:
ABK75555.1
hydroxymethylglutaryl-CoA lyase; Identified by match to protein family HMM PF00682; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
    0.764
ABK69876.1
Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family.
  
    0.749
ABK71234.1
Putative IclR family protein transcriptional regulator; Identified by match to protein family HMM PF01614.
  
    0.708
ABK73499.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.649
aroK
Shikimate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313.
 
  
 0.557
ABK74137.1
6-phosphogluconate dehydrogenase, decarboxylating; Identified by match to protein family HMM PF00393; match to protein family HMM PF03446; match to protein family HMM TIGR00872.
 
  
 0.547
ABK71405.1
Glycerate kinase; Identified by match to protein family HMM PF02595; match to protein family HMM TIGR00045; Belongs to the glycerate kinase type-1 family.
 
  
 0.528
ABK75464.1
Carbohydrate kinase, fggy; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782; Belongs to the FGGY kinase family.
 
  
 0.519
ABK74028.1
Putative xylulose kinase; Identified by match to protein family HMM PF00370.
 
  
 0.511
ABK75701.1
Xylulose kinase; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782; Belongs to the FGGY kinase family.
 
  
 0.494
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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