Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70218.1 | ABK71215.1 | MSMEG_2028 | MSMEG_2030 | Chloramphenicol resistance protein; Identified by match to protein family HMM PF07690. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.663 |
ABK70218.1 | ABK72406.1 | MSMEG_2028 | MSMEG_2810 | Chloramphenicol resistance protein; Identified by match to protein family HMM PF07690. | Major facilitator superfamily protein; Identified by match to protein family HMM PF07690. | 0.469 |
ABK70218.1 | ABK73803.1 | MSMEG_2028 | MSMEG_2029 | Chloramphenicol resistance protein; Identified by match to protein family HMM PF07690. | 3-ketoacyl-ACP/CoA redutase; Identified by match to protein family HMM PF00106. | 0.783 |
ABK70218.1 | ABK75334.1 | MSMEG_2028 | MSMEG_2027 | Chloramphenicol resistance protein; Identified by match to protein family HMM PF07690. | Conserved hypothetical protein TIGR00026; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.622 |
ABK71215.1 | ABK70218.1 | MSMEG_2030 | MSMEG_2028 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | Chloramphenicol resistance protein; Identified by match to protein family HMM PF07690. | 0.663 |
ABK71215.1 | ABK73803.1 | MSMEG_2030 | MSMEG_2029 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 3-ketoacyl-ACP/CoA redutase; Identified by match to protein family HMM PF00106. | 0.628 |
ABK71215.1 | ABK75334.1 | MSMEG_2030 | MSMEG_2027 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein TIGR00026; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.476 |
ABK72406.1 | ABK70218.1 | MSMEG_2810 | MSMEG_2028 | Major facilitator superfamily protein; Identified by match to protein family HMM PF07690. | Chloramphenicol resistance protein; Identified by match to protein family HMM PF07690. | 0.469 |
ABK73803.1 | ABK70218.1 | MSMEG_2029 | MSMEG_2028 | 3-ketoacyl-ACP/CoA redutase; Identified by match to protein family HMM PF00106. | Chloramphenicol resistance protein; Identified by match to protein family HMM PF07690. | 0.783 |
ABK73803.1 | ABK71215.1 | MSMEG_2029 | MSMEG_2030 | 3-ketoacyl-ACP/CoA redutase; Identified by match to protein family HMM PF00106. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.628 |
ABK73803.1 | ABK75334.1 | MSMEG_2029 | MSMEG_2027 | 3-ketoacyl-ACP/CoA redutase; Identified by match to protein family HMM PF00106. | Conserved hypothetical protein TIGR00026; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.670 |
ABK75334.1 | ABK70218.1 | MSMEG_2027 | MSMEG_2028 | Conserved hypothetical protein TIGR00026; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | Chloramphenicol resistance protein; Identified by match to protein family HMM PF07690. | 0.622 |
ABK75334.1 | ABK71215.1 | MSMEG_2027 | MSMEG_2030 | Conserved hypothetical protein TIGR00026; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.476 |
ABK75334.1 | ABK73803.1 | MSMEG_2027 | MSMEG_2029 | Conserved hypothetical protein TIGR00026; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 3-ketoacyl-ACP/CoA redutase; Identified by match to protein family HMM PF00106. | 0.670 |