Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70133.1 | ABK71308.1 | MSMEG_2070 | MSMEG_2059 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | 0.417 |
| ABK70133.1 | ABK71661.1 | MSMEG_2070 | MSMEG_2066 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | Conserved hypothetical protein. | 0.611 |
| ABK70133.1 | ABK72649.1 | MSMEG_2070 | MSMEG_2068 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | Hypothetical protein; Identified by Glimmer2; putative. | 0.916 |
| ABK70133.1 | ABK74806.1 | MSMEG_2070 | MSMEG_2069 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | Identified by match to protein family HMM PF01636. | 0.951 |
| ABK70133.1 | ABK75727.1 | MSMEG_2070 | MSMEG_2065 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | Identified by match to protein family HMM PF04264; Belongs to the UPF0312 family. | 0.554 |
| ABK70133.1 | nuoA | MSMEG_2070 | MSMEG_2063 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | NADH-quinone oxidoreductase, a subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. | 0.459 |
| ABK70133.1 | nuoB | MSMEG_2070 | MSMEG_2062 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.546 |
| ABK70133.1 | nuoC | MSMEG_2070 | MSMEG_2061 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | NADH-quinone oxidoreductase chain c; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. | 0.575 |
| ABK70133.1 | nuoD | MSMEG_2070 | MSMEG_2060 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | NADH-quinone oxidoreducatase, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.572 |
| ABK71308.1 | ABK70133.1 | MSMEG_2059 | MSMEG_2070 | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | 0.417 |
| ABK71308.1 | ABK71454.1 | MSMEG_2059 | MSMEG_2064 | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | Two-component system response regulator. | 0.936 |
| ABK71308.1 | ABK71661.1 | MSMEG_2059 | MSMEG_2066 | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | Conserved hypothetical protein. | 0.499 |
| ABK71308.1 | ABK75727.1 | MSMEG_2059 | MSMEG_2065 | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | Identified by match to protein family HMM PF04264; Belongs to the UPF0312 family. | 0.572 |
| ABK71308.1 | nuoA | MSMEG_2059 | MSMEG_2063 | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | NADH-quinone oxidoreductase, a subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. | 0.999 |
| ABK71308.1 | nuoB | MSMEG_2059 | MSMEG_2062 | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.999 |
| ABK71308.1 | nuoC | MSMEG_2059 | MSMEG_2061 | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | NADH-quinone oxidoreductase chain c; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. | 0.999 |
| ABK71308.1 | nuoD | MSMEG_2059 | MSMEG_2060 | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | NADH-quinone oxidoreducatase, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.999 |
| ABK71454.1 | ABK71308.1 | MSMEG_2064 | MSMEG_2059 | Two-component system response regulator. | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | 0.936 |
| ABK71454.1 | ABK71661.1 | MSMEG_2064 | MSMEG_2066 | Two-component system response regulator. | Conserved hypothetical protein. | 0.778 |
| ABK71454.1 | ABK72649.1 | MSMEG_2064 | MSMEG_2068 | Two-component system response regulator. | Hypothetical protein; Identified by Glimmer2; putative. | 0.561 |
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