STRINGSTRING
ABK72649.1 ABK72649.1 ABK74806.1 ABK74806.1 ABK70133.1 ABK70133.1 ABK72429.1 ABK72429.1 ABK73940.1 ABK73940.1 hmgA hmgA ABK72430.1 ABK72430.1 ABK71174.1 ABK71174.1 ABK70656.1 ABK70656.1 ABK73305.1 ABK73305.1 ABK71454.1 ABK71454.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72649.1Hypothetical protein; Identified by Glimmer2; putative. (118 aa)    
Predicted Functional Partners:
ABK74806.1
Identified by match to protein family HMM PF01636.
 
    0.976
ABK70133.1
Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
  
 
 0.916
ABK72429.1
Conserved hypothetical protein.
  
  
 0.898
ABK73940.1
3-hydroxy-3-methylglutaryl-CoA lyase; Identified by match to protein family HMM PF00682.
  
  
 0.897
hmgA
Homogentisate 1,2-dioxygenase; Identified by match to protein family HMM PF04209.
  
  
 0.896
ABK72430.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
    0.800
ABK71174.1
Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family.
  
    0.784
ABK70656.1
acyl-CoA dehydrogenase, C- domain protein; Identified by match to protein family HMM PF08028.
  
 
 0.609
ABK73305.1
Oxidoreductase, zinc-binding dehydrogenase family protein; Identified by match to protein family HMM PF00107.
  
   0.572
ABK71454.1
Two-component system response regulator.
  
    0.561
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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