STRINGSTRING
ABK70656.1 ABK70656.1 ABK73895.1 ABK73895.1 ABK71075.1 ABK71075.1 ABK74830.1 ABK74830.1 ABK73174.1 ABK73174.1 ABK71346.1 ABK71346.1 ABK73431.1 ABK73431.1 ABK73940.1 ABK73940.1 ABK75990.1 ABK75990.1 ABK75265.1 ABK75265.1 ABK71507.1 ABK71507.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ABK70656.1acyl-CoA dehydrogenase, C- domain protein; Identified by match to protein family HMM PF08028. (393 aa)    
Predicted Functional Partners:
ABK73895.1
Biphenyl-2,3-diol 1,2-dioxygenase; Identified by match to protein family HMM PF00903.
 
 
 0.958
ABK71075.1
Biphenyl-2,3-diol 1,2-dioxygenase 1; Identified by match to protein family HMM PF00903.
  
 
 0.957
ABK74830.1
Nitrilotriacetate monooxygenase component B; Identified by match to protein family HMM PF01613.
 
 
 0.929
ABK73174.1
Pigment production hydroxylase; Identified by match to protein family HMM PF08028.
  
 
 
0.924
ABK71346.1
Pigment production hydroxylase; Identified by match to protein family HMM PF08028.
  
 
 
0.920
ABK73431.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04229.
       0.769
ABK73940.1
3-hydroxy-3-methylglutaryl-CoA lyase; Identified by match to protein family HMM PF00682.
  
 0.734
ABK75990.1
Putative 3-hydroxyacyl-CoA dehydrogenase; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737.
  
 0.704
ABK75265.1
enoyl-CoA hydratase; Identified by match to protein family HMM PF00378.
 
 0.693
ABK71507.1
Probable enoyl-CoA hydratase; Identified by match to protein family HMM PF00378.
 
 0.658
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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