STRINGSTRING
ABK72173.1 ABK72173.1 ABK70152.1 ABK70152.1 ABK72495.1 ABK72495.1 ABK71685.1 ABK71685.1 ABK74762.1 ABK74762.1 ABK71895.1 ABK71895.1 ABK71607.1 ABK71607.1 ABK70061.1 ABK70061.1 ABK70866.1 ABK70866.1 ssuB-3 ssuB-3 ssuB-2 ssuB-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Experiments
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[Homology]
Score
ABK72173.1ABC transporter, substrate binding protein [nitrate/sulfonate], putative. (321 aa)    
Predicted Functional Partners:
ABK70152.1
Nitrate transport ATP-binding protein NrtD; Identified by match to protein family HMM PF00005.
 
 
 0.976
ABK72495.1
Aliphatic sulfonate binding protein; Identified by match to protein family HMM TIGR01728.
  
 
  0.972
ABK71685.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 
 0.971
ABK74762.1
ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit; Identified by match to protein family HMM PF00528.
 
 
 0.971
ABK71895.1
Putative aliphatic sulfonates transport permease protein SsuC; Identified by match to protein family HMM PF00528.
 
 
 0.971
ABK71607.1
Putative aliphatic sulfonates transport permease protein SsuC; Identified by match to protein family HMM PF00528.
 
 
 0.970
ABK70061.1
ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit, putative; Identified by match to protein family HMM PF00528.
 
 
 0.969
ABK70866.1
Hypothetical protein; Identified by Glimmer2; putative.
  
 
  0.960
ssuB-3
ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
 0.954
ssuB-2
Putative aliphatic sulfonates transport ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
 0.953
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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