STRINGSTRING
ABK74913.1 ABK74913.1 ABK72578.1 ABK72578.1 ABK73580.1 ABK73580.1 ABK70397.1 ABK70397.1 ABK70575.1 ABK70575.1 ABK73393.1 ABK73393.1 ABK75570.1 ABK75570.1 ABK75115.1 ABK75115.1 ABK70025.1 ABK70025.1 ABK76052.1 ABK76052.1 ABK73311.1 ABK73311.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74913.1Conserved hypothetical protein. (312 aa)    
Predicted Functional Partners:
ABK72578.1
Conserved hypothetical protein.
 
    0.975
ABK73580.1
Putative transcriptional regulator; Identified by match to protein family HMM PF00440; match to protein family HMM PF02796.
 
    0.891
ABK70397.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
 
    0.749
ABK70575.1
Conserved hypothetical protein.
  
    0.702
ABK73393.1
Integral membrane protein.
  
    0.620
ABK75570.1
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.615
ABK75115.1
Mce related protein; Identified by match to protein family HMM PF02470.
  
    0.580
ABK70025.1
Conserved hypothetical protein.
  
    0.579
ABK76052.1
Identified by match to protein family HMM TIGR01409.
  
  
 0.572
ABK73311.1
Mce related protein; Identified by match to protein family HMM PF02470.
  
    0.565
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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