Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69658.1 | ABK69945.1 | MSMEG_6130 | MSMEG_2115 | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | Conserved hypothetical protein. | 0.514 |
| ABK69658.1 | ABK73831.1 | MSMEG_6130 | MSMEG_6542 | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | B12 binding domain protein; Identified by match to protein family HMM PF02310. | 0.415 |
| ABK69658.1 | ABK74572.1 | MSMEG_6130 | MSMEG_6541 | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | Anti-sigma factor antagonist; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. | 0.602 |
| ABK69658.1 | ABK76009.1 | MSMEG_6130 | MSMEG_2112 | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | Secreted protein. | 0.510 |
| ABK69658.1 | ABK76188.1 | MSMEG_6130 | MSMEG_6131 | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | Magnesium or manganese-dependent protein phosphatase; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228. | 0.996 |
| ABK69945.1 | ABK69658.1 | MSMEG_2115 | MSMEG_6130 | Conserved hypothetical protein. | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | 0.514 |
| ABK69945.1 | ABK70272.1 | MSMEG_2115 | MSMEG_5819 | Conserved hypothetical protein. | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | 0.490 |
| ABK69945.1 | ABK70408.1 | MSMEG_2115 | MSMEG_3960 | Conserved hypothetical protein. | Transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.486 |
| ABK69945.1 | ABK71745.1 | MSMEG_2115 | MSMEG_5522 | Conserved hypothetical protein. | Transcriptional Regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.537 |
| ABK69945.1 | ABK73831.1 | MSMEG_2115 | MSMEG_6542 | Conserved hypothetical protein. | B12 binding domain protein; Identified by match to protein family HMM PF02310. | 0.688 |
| ABK69945.1 | ABK74300.1 | MSMEG_2115 | MSMEG_2111 | Conserved hypothetical protein. | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. May play some role in the pathogenicity. | 0.581 |
| ABK69945.1 | ABK74572.1 | MSMEG_2115 | MSMEG_6541 | Conserved hypothetical protein. | Anti-sigma factor antagonist; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. | 0.673 |
| ABK69945.1 | ABK75797.1 | MSMEG_2115 | MSMEG_1225 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.522 |
| ABK69945.1 | ABK76009.1 | MSMEG_2115 | MSMEG_2112 | Conserved hypothetical protein. | Secreted protein. | 0.957 |
| ABK69945.1 | ABK76188.1 | MSMEG_2115 | MSMEG_6131 | Conserved hypothetical protein. | Magnesium or manganese-dependent protein phosphatase; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228. | 0.524 |
| ABK70272.1 | ABK69945.1 | MSMEG_5819 | MSMEG_2115 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Conserved hypothetical protein. | 0.490 |
| ABK70272.1 | ABK76009.1 | MSMEG_5819 | MSMEG_2112 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Secreted protein. | 0.595 |
| ABK70408.1 | ABK69945.1 | MSMEG_3960 | MSMEG_2115 | Transcriptional regulator; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein. | 0.486 |
| ABK70408.1 | ABK71745.1 | MSMEG_3960 | MSMEG_5522 | Transcriptional regulator; Identified by match to protein family HMM PF00440. | Transcriptional Regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.412 |
| ABK70408.1 | ABK76009.1 | MSMEG_3960 | MSMEG_2112 | Transcriptional regulator; Identified by match to protein family HMM PF00440. | Secreted protein. | 0.416 |
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