Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70003.1 | ABK70627.1 | MSMEG_4509 | MSMEG_4516 | MbtG protein. | 2,3-dihydroxybenzoate-AMP ligase; Identified by match to protein family HMM PF00501. | 0.978 |
ABK70003.1 | ABK70717.1 | MSMEG_4509 | MSMEG_4513 | MbtG protein. | Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF02801; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.989 |
ABK70003.1 | ABK71448.1 | MSMEG_4509 | MSMEG_6553 | MbtG protein. | ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.841 |
ABK70003.1 | ABK72388.1 | MSMEG_4509 | MSMEG_6554 | MbtG protein. | Hypothetical ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00970; match to protein family HMM PF04954; match to protein family HMM PF08021. | 0.768 |
ABK70003.1 | ABK72502.1 | MSMEG_4509 | MSMEG_2128 | MbtG protein. | Malonyl CoA decarboxylase. | 0.890 |
ABK70627.1 | ABK70003.1 | MSMEG_4516 | MSMEG_4509 | 2,3-dihydroxybenzoate-AMP ligase; Identified by match to protein family HMM PF00501. | MbtG protein. | 0.978 |
ABK70627.1 | ABK70717.1 | MSMEG_4516 | MSMEG_4513 | 2,3-dihydroxybenzoate-AMP ligase; Identified by match to protein family HMM PF00501. | Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF02801; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.989 |
ABK70627.1 | ABK71448.1 | MSMEG_4516 | MSMEG_6553 | 2,3-dihydroxybenzoate-AMP ligase; Identified by match to protein family HMM PF00501. | ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.683 |
ABK70627.1 | ABK72388.1 | MSMEG_4516 | MSMEG_6554 | 2,3-dihydroxybenzoate-AMP ligase; Identified by match to protein family HMM PF00501. | Hypothetical ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00970; match to protein family HMM PF04954; match to protein family HMM PF08021. | 0.767 |
ABK70627.1 | ABK72502.1 | MSMEG_4516 | MSMEG_2128 | 2,3-dihydroxybenzoate-AMP ligase; Identified by match to protein family HMM PF00501. | Malonyl CoA decarboxylase. | 0.751 |
ABK70627.1 | ABK73576.1 | MSMEG_4516 | MSMEG_0022 | 2,3-dihydroxybenzoate-AMP ligase; Identified by match to protein family HMM PF00501. | L-ornithine 5-monooxygenase. | 0.573 |
ABK70717.1 | ABK70003.1 | MSMEG_4513 | MSMEG_4509 | Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF02801; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | MbtG protein. | 0.989 |
ABK70717.1 | ABK70627.1 | MSMEG_4513 | MSMEG_4516 | Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF02801; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 2,3-dihydroxybenzoate-AMP ligase; Identified by match to protein family HMM PF00501. | 0.989 |
ABK70717.1 | ABK72502.1 | MSMEG_4513 | MSMEG_2128 | Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF02801; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Malonyl CoA decarboxylase. | 0.625 |
ABK70771.1 | ABK71448.1 | MSMEG_2130 | MSMEG_6553 | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.412 |
ABK70771.1 | ABK71749.1 | MSMEG_2130 | MSMEG_5591 | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | Conserved hypothetical protein; Identified by match to protein family HMM PF05908. | 0.442 |
ABK70771.1 | ABK72388.1 | MSMEG_2130 | MSMEG_6554 | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | Hypothetical ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00970; match to protein family HMM PF04954; match to protein family HMM PF08021. | 0.476 |
ABK70771.1 | ABK72502.1 | MSMEG_2130 | MSMEG_2128 | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | Malonyl CoA decarboxylase. | 0.745 |
ABK71448.1 | ABK70003.1 | MSMEG_6553 | MSMEG_4509 | ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. | MbtG protein. | 0.841 |
ABK71448.1 | ABK70627.1 | MSMEG_6553 | MSMEG_4516 | ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. | 2,3-dihydroxybenzoate-AMP ligase; Identified by match to protein family HMM PF00501. | 0.683 |
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