STRINGSTRING
ABK72502.1 ABK72502.1 ABK70003.1 ABK70003.1 ABK71600.1 ABK71600.1 ABK70627.1 ABK70627.1 ABK70771.1 ABK70771.1 ABK72388.1 ABK72388.1 ABK71448.1 ABK71448.1 ABK73576.1 ABK73576.1 ABK70717.1 ABK70717.1 ABK71749.1 ABK71749.1 ABK73397.1 ABK73397.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72502.1Malonyl CoA decarboxylase. (215 aa)    
Predicted Functional Partners:
ABK70003.1
MbtG protein.
 
  
 0.890
ABK71600.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04343.
       0.794
ABK70627.1
2,3-dihydroxybenzoate-AMP ligase; Identified by match to protein family HMM PF00501.
  
  
 0.751
ABK70771.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
  
  
 0.745
ABK72388.1
Hypothetical ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00970; match to protein family HMM PF04954; match to protein family HMM PF08021.
 
  
 0.725
ABK71448.1
ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.
 
  
 0.680
ABK73576.1
L-ornithine 5-monooxygenase.
 
  
 0.631
ABK70717.1
Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF02801; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.625
ABK71749.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05908.
 
     0.603
ABK73397.1
Conserved hypothetical protein.
  
    0.584
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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